Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC010587.2-201ENST00000511727 448 ntBASIC0.07□□□□□ -2.4
CFTRP13569 RN7SKP12-201ENST00000516275 143 ntBASIC0.07□□□□□ -2.4
CFTRP13569 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.07□□□□□ -2.4
CFTRP13569 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
CFTRP13569 AL358072.1-201ENST00000604156 575 ntBASIC0.07□□□□□ -2.4
CFTRP13569 AC021506.2-201ENST00000612354 169 ntBASIC0.07□□□□□ -2.4
CFTRP13569 AC005332.6-201ENST00000613178 446 ntBASIC0.07□□□□□ -2.4
CFTRP13569 AC120349.2-201ENST00000625002 298 ntBASIC0.07□□□□□ -2.4
CFTRP13569 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
CFTRP13569 MIR340-201ENST00000362125 95 ntBASIC0.06□□□□□ -2.4
CFTRP13569 SNORD3E-201ENST00000362899 217 ntBASIC0.06□□□□□ -2.4
CFTRP13569 RNU4-73P-201ENST00000363164 141 ntBASIC0.06□□□□□ -2.4
CFTRP13569 SNORD114-31-201ENST00000363219 75 ntBASIC0.06□□□□□ -2.4
CFTRP13569 MIR301A-201ENST00000385261 86 ntBASIC0.06□□□□□ -2.4
CFTRP13569 SNORD99-201ENST00000408612 74 ntBASIC0.06□□□□□ -2.4
CFTRP13569 AC011233.1-201ENST00000422812 283 ntBASIC0.06□□□□□ -2.4
CFTRP13569 MTND4LP14-201ENST00000429447 288 ntBASIC0.06□□□□□ -2.4
CFTRP13569 USP9YP14-201ENST00000430663 563 ntBASIC0.06□□□□□ -2.4
CFTRP13569 SNRPEP8-201ENST00000442866 260 ntBASIC0.06□□□□□ -2.4
CFTRP13569 AC104982.1-201ENST00000478775 574 ntBASIC0.06□□□□□ -2.4
CFTRP13569 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.06□□□□□ -2.4
CFTRP13569 AC092325.1-201ENST00000566449 554 ntBASIC0.06□□□□□ -2.4
CFTRP13569 MTCYBP33-201ENST00000575007 1130 ntBASIC0.06□□□□□ -2.4
CFTRP13569 AC060771.1-201ENST00000582031 164 ntBASIC0.06□□□□□ -2.4
CFTRP13569 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.05□□□□□ -2.4
CFTRP13569 RNU6-950P-201ENST00000384651 107 ntBASIC0.05□□□□□ -2.4
CFTRP13569 MIR604-201ENST00000384880 94 ntBASIC0.05□□□□□ -2.4
CFTRP13569 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
CFTRP13569 AL359634.1-202ENST00000404721 284 ntBASIC0.05□□□□□ -2.4
CFTRP13569 MTCO3P41-201ENST00000414801 328 ntBASIC0.05□□□□□ -2.4
CFTRP13569 RNFT1P2-201ENST00000443064 757 ntBASIC0.05□□□□□ -2.4
CFTRP13569 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.05□□□□□ -2.4
CFTRP13569 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.05□□□□□ -2.4
CFTRP13569 AL162395.1-201ENST00000457882 422 ntBASIC0.05□□□□□ -2.4
CFTRP13569 RPS26P48-201ENST00000491713 339 ntBASIC0.05□□□□□ -2.4
CFTRP13569 RPL23AP54-201ENST00000495129 419 ntBASIC0.05□□□□□ -2.4
CFTRP13569 MTND2P33-201ENST00000506452 1031 ntBASIC0.05□□□□□ -2.4
CFTRP13569 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.05□□□□□ -2.4
CFTRP13569 AC090330.1-201ENST00000588646 764 ntBASIC0.05□□□□□ -2.4
CFTRP13569 MTRNR2L2-201ENST00000604882 87 ntBASIC0.05□□□□□ -2.4
CFTRP13569 AL159153.1-201ENST00000619688 317 ntBASIC0.05□□□□□ -2.4
CFTRP13569 RNU6-1327P-201ENST00000365302 105 ntBASIC0.04□□□□□ -2.4
CFTRP13569 RNU6-438P-201ENST00000365561 103 ntBASIC0.04□□□□□ -2.4
CFTRP13569 MIR1295A-201ENST00000408463 79 ntBASIC0.04□□□□□ -2.4
CFTRP13569 AL590623.1-201ENST00000427864 105 ntBASIC0.04□□□□□ -2.4
CFTRP13569 MRPL42P4-201ENST00000453267 443 ntBASIC0.04□□□□□ -2.4
CFTRP13569 RNU7-136P-201ENST00000458819 69 ntBASIC0.04□□□□□ -2.4
CFTRP13569 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.04□□□□□ -2.4
CFTRP13569 AC025627.3-201ENST00000582078 182 ntBASIC0.04□□□□□ -2.4
CFTRP13569 SNORD3E-202ENST00000627253 216 ntBASIC0.04□□□□□ -2.4
CFTRP13569 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.04□□□□□ -2.4
CFTRP13569 RNU6-39P-201ENST00000384344 107 ntBASIC0.03□□□□□ -2.4
CFTRP13569 Y_RNA.552-201ENST00000384665 112 ntBASIC0.03□□□□□ -2.4
CFTRP13569 RNU6-932P-201ENST00000391108 106 ntBASIC0.03□□□□□ -2.4
CFTRP13569 MTCO1P21-201ENST00000416634 589 ntBASIC0.03□□□□□ -2.4
CFTRP13569 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.03□□□□□ -2.4
CFTRP13569 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.03□□□□□ -2.4
CFTRP13569 AC108740.1-201ENST00000498629 225 ntBASIC0.03□□□□□ -2.4
CFTRP13569 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.03□□□□□ -2.4
CFTRP13569 MTCO3P28-201ENST00000513351 515 ntBASIC0.03□□□□□ -2.4
CFTRP13569 SNORA68.3-201ENST00000515906 83 ntBASIC0.03□□□□□ -2.4
CFTRP13569 RNU5F-2P-201ENST00000516066 82 ntBASIC0.03□□□□□ -2.4
CFTRP13569 AC091163.3-201ENST00000518269 1144 ntBASIC0.03□□□□□ -2.4
CFTRP13569 ZNF971P-201ENST00000562068 1249 ntBASIC0.03□□□□□ -2.4
CFTRP13569 AL513534.2-201ENST00000603836 250 ntBASIC0.03□□□□□ -2.4
CFTRP13569 AC007363.1-201ENST00000604736 620 ntBASIC0.03□□□□□ -2.4
CFTRP13569 AC097372.5-201ENST00000623665 376 ntBASIC0.03□□□□□ -2.4
CFTRP13569 MIR411-201ENST00000362239 96 ntBASIC0.03□□□□□ -2.41
CFTRP13569 SNORA4.2-201ENST00000365313 147 ntBASIC0.03□□□□□ -2.41
CFTRP13569 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.03□□□□□ -2.41
CFTRP13569 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.03□□□□□ -2.41
CFTRP13569 AL031313.1-201ENST00000448435 256 ntBASIC0.03□□□□□ -2.41
CFTRP13569 SNORA76.2-201ENST00000517095 137 ntBASIC0.03□□□□□ -2.41
CFTRP13569 AC023632.1-201ENST00000518463 375 ntBASIC0.03□□□□□ -2.41
CFTRP13569 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.03□□□□□ -2.41
CFTRP13569 SNRPGP1-201ENST00000553864 222 ntBASIC0.03□□□□□ -2.41
CFTRP13569 AL133153.1-201ENST00000557756 303 ntBASIC0.03□□□□□ -2.41
CFTRP13569 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.03□□□□□ -2.41
CFTRP13569 AL132657.2-201ENST00000564417 358 ntBASIC0.03□□□□□ -2.41
CFTRP13569 RPL21P136-201ENST00000605378 396 ntBASIC0.03□□□□□ -2.41
CFTRP13569 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.41
CFTRP13569 AC107982.1-201ENST00000507171 1300 ntBASIC0.02□□□□□ -2.41
CFTRP13569 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
CFTRP13569 U3.9-201ENST00000363823 204 ntBASIC0.02□□□□□ -2.41
CFTRP13569 SNORD116-20-201ENST00000384529 92 ntBASIC0.02□□□□□ -2.41
CFTRP13569 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
CFTRP13569 RNU6-1025P-201ENST00000410629 104 ntBASIC0.02□□□□□ -2.41
CFTRP13569 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.02□□□□□ -2.41
CFTRP13569 MTCYBP5-201ENST00000423752 1135 ntBASIC0.02□□□□□ -2.41
CFTRP13569 SEPT7P5-201ENST00000434048 306 ntBASIC0.02□□□□□ -2.41
CFTRP13569 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.02□□□□□ -2.41
CFTRP13569 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.02□□□□□ -2.41
CFTRP13569 RNU7-90P-201ENST00000459216 62 ntBASIC0.02□□□□□ -2.41
CFTRP13569 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.02□□□□□ -2.41
CFTRP13569 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.02□□□□□ -2.41
CFTRP13569 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.02□□□□□ -2.41
CFTRP13569 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.02□□□□□ -2.41
CFTRP13569 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.02□□□□□ -2.41
CFTRP13569 MIRLET7D-201ENST00000362263 87 ntBASIC0.01□□□□□ -2.41
CFTRP13569 AC003071.1-201ENST00000451219 789 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 577 ms