Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 SNRPGP20-201ENST00000604477 205 ntBASIC4.15□□□□□ -1.75
HOXD8P13378 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.15□□□□□ -1.75
HOXD8P13378 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXD8P13378 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXD8P13378 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXD8P13378 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXD8P13378 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXD8P13378 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXD8P13378 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXD8P13378 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HOXD8P13378 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HOXD8P13378 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
HOXD8P13378 Y_RNA.75-201ENST00000362927 97 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 RNU6-1168P-201ENST00000390831 104 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 SNORA26.3-201ENST00000391119 136 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 AL357075.1-201ENST00000404107 726 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 RNA5SP390-201ENST00000410191 113 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 AC009963.1-201ENST00000417265 157 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXD8P13378 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 RNA5SP468-201ENST00000516782 93 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 ACA59.2-201ENST00000517061 156 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 SUMO2P18-201ENST00000518873 252 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXD8P13378 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD8P13378 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 AC090897.2-201ENST00000581715 130 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 AC004825.2-201ENST00000616634 455 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 SNORD98-201ENST00000636377 67 ntBASIC4.14□□□□□ -1.75
HOXD8P13378 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXD8P13378 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD8P13378 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD8P13378 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD8P13378 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD8P13378 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD8P13378 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
HOXD8P13378 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXD8P13378 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD8P13378 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXD8P13378 SNORD9-201ENST00000362566 104 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 RNA5SP502-201ENST00000362694 119 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 RNA5SP189-201ENST00000364920 115 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 Y_RNA.586-201ENST00000391146 98 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 ELOCP21-201ENST00000412558 336 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 CR769767.1-201ENST00000436337 346 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 AC008267.6-201ENST00000441664 139 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 HMGN2P10-201ENST00000448085 265 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 RNA5SP272-201ENST00000516095 111 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 AC011602.1-201ENST00000546484 331 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 CYP4A27P-201ENST00000567218 190 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 AC105137.2-201ENST00000569073 466 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 AL356575.1-201ENST00000603008 283 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 MIR3199-2-201ENST00000636243 86 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 AP000553.6-201ENST00000641242 118 ntBASIC4.13□□□□□ -1.75
HOXD8P13378 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD8P13378 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD8P13378 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD8P13378 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXD8P13378 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD8P13378 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD8P13378 AL356274.2-201ENST00000624379 3752 ntBASIC4.12□□□□□ -1.75
HOXD8P13378 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD8P13378 AC087190.4-201ENST00000574616 8334 ntBASIC4.12□□□□□ -1.75
HOXD8P13378 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD8P13378 RNA5SP72-201ENST00000364442 117 ntBASIC4.12□□□□□ -1.75
HOXD8P13378 U3.26-201ENST00000391236 204 ntBASIC4.12□□□□□ -1.75
HOXD8P13378 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXD8P13378 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.12□□□□□ -1.75
HOXD8P13378 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD8P13378 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.12□□□□□ -1.75
HOXD8P13378 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
HOXD8P13378 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HOXD8P13378 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD8P13378 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HOXD8P13378 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD8P13378 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HOXD8P13378 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HOXD8P13378 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXD8P13378 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXD8P13378 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXD8P13378 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD8P13378 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HOXD8P13378 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD8P13378 RNU1-62P-201ENST00000362599 164 ntBASIC4.11□□□□□ -1.75
HOXD8P13378 RNU6-275P-201ENST00000364910 107 ntBASIC4.11□□□□□ -1.75
HOXD8P13378 RNA5SP167-201ENST00000365461 116 ntBASIC4.11□□□□□ -1.75
HOXD8P13378 RNU6-1199P-201ENST00000411249 104 ntBASIC4.11□□□□□ -1.75
HOXD8P13378 Y_RNA.629-201ENST00000411368 105 ntBASIC4.11□□□□□ -1.75
HOXD8P13378 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXD8P13378 AC096649.2-201ENST00000416186 393 ntBASIC4.11□□□□□ -1.75
HOXD8P13378 AC007215.1-201ENST00000464893 276 ntBASIC4.11□□□□□ -1.75
HOXD8P13378 AC107626.1-201ENST00000471084 183 ntBASIC4.11□□□□□ -1.75
HOXD8P13378 AC078817.1-201ENST00000492623 435 ntBASIC4.11□□□□□ -1.75
HOXD8P13378 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXD8P13378 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXD8P13378 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXD8P13378 AC021739.1-201ENST00000559631 174 ntBASIC4.11□□□□□ -1.75
HOXD8P13378 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD8P13378 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms