Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 AC073534.2-201ENST00000620377 381 ntBASIC1.47□□□□□ -2.17
IGHV3-43DP0DP04 AC068792.1-201ENST00000621354 417 ntBASIC1.47□□□□□ -2.17
IGHV3-43DP0DP04 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
IGHV3-43DP0DP04 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
IGHV3-43DP0DP04 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 RNU6-1085P-201ENST00000363576 107 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 RNU6-82P-201ENST00000363970 107 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 Y_RNA.378-201ENST00000365652 113 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 RNU6-26P-201ENST00000383985 107 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 RNU6-38P-201ENST00000384085 107 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 MIR583-201ENST00000384846 75 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 MTCO3P40-201ENST00000392516 676 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 AP000275.1-201ENST00000411943 390 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 HMGN2P38-201ENST00000423806 265 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 AL645568.3-201ENST00000433683 316 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 RNU6-333P-201ENST00000459117 107 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 RPL39P5-202ENST00000512505 151 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 AC087854.1-201ENST00000519706 414 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 AL118558.2-201ENST00000556294 238 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 AC021231.3-201ENST00000558497 370 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 AL109918.3-201ENST00000603072 338 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 AL078605.1-201ENST00000603529 500 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 AL773524.1-201ENST00000614065 229 ntBASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.46□□□□□ -2.18
IGHV3-43DP0DP04 RNU6-234P-201ENST00000365229 104 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 RNU4-20P-201ENST00000365601 151 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 RNU6-160P-201ENST00000384591 107 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AC244636.1-201ENST00000421152 228 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 Z83846.1-201ENST00000446798 265 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 RNU6-1037P-201ENST00000459571 107 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 RPL23AP42-201ENST00000471152 471 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AC107401.1-201ENST00000503426 685 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 MRPS17P9-201ENST00000511924 393 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 RNU6-567P-201ENST00000516746 107 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 RNU6-323P-201ENST00000521915 107 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AP005597.4-201ENST00000526762 229 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AC025423.5-201ENST00000550230 219 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AC024614.2-201ENST00000577584 372 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 MIR3618-201ENST00000580330 88 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 MIR4513-201ENST00000581077 86 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 CYP2C61P-201ENST00000604072 290 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 Z98751.3-201ENST00000604447 521 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AL357078.3-201ENST00000607528 618 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AC009318.2-201ENST00000610917 651 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AL121757.2-201ENST00000611223 313 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AL359880.1-201ENST00000621879 266 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AC130454.1-201ENST00000622948 401 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AC124864.2-201ENST00000624736 186 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 AL450472.1-202ENST00000637286 180 ntBASIC1.45□□□□□ -2.18
IGHV3-43DP0DP04 SNORD114-1-201ENST00000362705 72 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 RNU6-23P-201ENST00000363283 107 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 U3.9-201ENST00000363823 204 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 SNORA36A-201ENST00000384221 132 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 SNORA8-201ENST00000384574 139 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 RNA5SP201-201ENST00000410316 124 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 RNU2-16P-201ENST00000410712 136 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 HMGN2P18-201ENST00000450680 270 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 PPP1R2P5-201ENST00000457256 603 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 RNA5SP57-201ENST00000459463 123 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 Y_RNA.654-201ENST00000497848 106 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 AC008628.2-201ENST00000502605 298 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 AC005741.1-201ENST00000511094 432 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 SNORA19.2-201ENST00000516013 114 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 RNU1-41P-201ENST00000516161 162 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 RNU1-48P-201ENST00000516400 162 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 RNU6-1069P-201ENST00000516612 133 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 RNU6-612P-201ENST00000516909 102 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 RNU6-835P-201ENST00000516974 104 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 AC104576.1-201ENST00000524225 88 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 CYP4A27P-201ENST00000567218 190 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 AL096840.1-201ENST00000603287 93 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 AC092807.2-201ENST00000609367 243 ntBASIC1.44□□□□□ -2.18
IGHV3-43DP0DP04 AC013412.1-201ENST00000610687 192 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms