Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SNRPFP4-201ENST00000456366 242 ntBASIC0.91□□□□□ -2.26
TPM1P09493 HSPE1P23-201ENST00000509838 286 ntBASIC0.91□□□□□ -2.26
TPM1P09493 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.91□□□□□ -2.26
TPM1P09493 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
TPM1P09493 EIF4A1P12-201ENST00000551910 141 ntBASIC0.91□□□□□ -2.26
TPM1P09493 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.91□□□□□ -2.26
TPM1P09493 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.91□□□□□ -2.26
TPM1P09493 FAM71BP1-201ENST00000604431 523 ntBASIC0.91□□□□□ -2.26
TPM1P09493 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
TPM1P09493 AL139418.1-201ENST00000613613 177 ntBASIC0.91□□□□□ -2.26
TPM1P09493 AC126177.8-201ENST00000618339 1015 ntBASIC0.91□□□□□ -2.26
TPM1P09493 Y_RNA.18-201ENST00000362461 102 ntBASIC0.9□□□□□ -2.27
TPM1P09493 Y_RNA.132-201ENST00000363421 102 ntBASIC0.9□□□□□ -2.27
TPM1P09493 AC010099.3-201ENST00000423896 409 ntBASIC0.9□□□□□ -2.27
TPM1P09493 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.9□□□□□ -2.27
TPM1P09493 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.9□□□□□ -2.27
TPM1P09493 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.9□□□□□ -2.27
TPM1P09493 SNORA70.22-201ENST00000517160 124 ntBASIC0.9□□□□□ -2.27
TPM1P09493 RNU6-165P-201ENST00000517170 99 ntBASIC0.9□□□□□ -2.27
TPM1P09493 HSPE1P4-201ENST00000550617 308 ntBASIC0.9□□□□□ -2.27
TPM1P09493 AC008088.1-201ENST00000580993 280 ntBASIC0.9□□□□□ -2.27
TPM1P09493 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.9□□□□□ -2.27
TPM1P09493 AL356157.2-201ENST00000605122 111 ntBASIC0.9□□□□□ -2.27
TPM1P09493 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
TPM1P09493 AC092268.1-201ENST00000342691 405 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-37P-201ENST00000362692 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-11P-201ENST00000364234 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 SNORD32A-201ENST00000364805 84 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-534P-201ENST00000364877 106 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-336P-201ENST00000364891 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-877P-201ENST00000383868 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-25P-201ENST00000383873 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-1-201ENST00000383898 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-48P-201ENST00000384161 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-36P-201ENST00000384172 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-4P-201ENST00000384205 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-5P-201ENST00000384238 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-3P-201ENST00000384314 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-16P-201ENST00000384385 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-15P-201ENST00000384534 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-2-201ENST00000384627 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-29P-201ENST00000384637 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-9-201ENST00000384776 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-33P-201ENST00000384793 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.89□□□□□ -2.27
TPM1P09493 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.89□□□□□ -2.27
TPM1P09493 COX6CP14-201ENST00000469580 174 ntBASIC0.89□□□□□ -2.27
TPM1P09493 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.89□□□□□ -2.27
TPM1P09493 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.89□□□□□ -2.27
TPM1P09493 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.89□□□□□ -2.27
TPM1P09493 RN7SKP219-201ENST00000516825 296 ntBASIC0.89□□□□□ -2.27
TPM1P09493 AC109479.2-201ENST00000517842 174 ntBASIC0.89□□□□□ -2.27
TPM1P09493 CBX3P8-201ENST00000532412 525 ntBASIC0.89□□□□□ -2.27
TPM1P09493 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
TPM1P09493 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.89□□□□□ -2.27
TPM1P09493 AC015712.3-201ENST00000559380 164 ntBASIC0.89□□□□□ -2.27
TPM1P09493 VN1R107P-201ENST00000601784 209 ntBASIC0.89□□□□□ -2.27
TPM1P09493 RNU6-6P-201ENST00000606623 107 ntBASIC0.89□□□□□ -2.27
TPM1P09493 AL031775.1-201ENST00000607014 887 ntBASIC0.89□□□□□ -2.27
TPM1P09493 AC091895.1-201ENST00000624494 256 ntBASIC0.89□□□□□ -2.27
TPM1P09493 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.89□□□□□ -2.27
TPM1P09493 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.89□□□□□ -2.27
TPM1P09493 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TPM1P09493 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TPM1P09493 Y_RNA.22-201ENST00000362492 102 ntBASIC0.88□□□□□ -2.27
TPM1P09493 SNORA72.2-201ENST00000365028 127 ntBASIC0.88□□□□□ -2.27
TPM1P09493 Y_RNA.324-201ENST00000365165 102 ntBASIC0.88□□□□□ -2.27
TPM1P09493 RNU6-533P-201ENST00000384144 107 ntBASIC0.88□□□□□ -2.27
TPM1P09493 RNU6-378P-201ENST00000384324 107 ntBASIC0.88□□□□□ -2.27
TPM1P09493 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
TPM1P09493 AC060773.1-201ENST00000421698 310 ntBASIC0.88□□□□□ -2.27
TPM1P09493 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.88□□□□□ -2.27
TPM1P09493 EXOSC3P1-201ENST00000448649 500 ntBASIC0.88□□□□□ -2.27
TPM1P09493 RNU7-34P-201ENST00000459394 64 ntBASIC0.88□□□□□ -2.27
TPM1P09493 AL163973.1-201ENST00000484753 577 ntBASIC0.88□□□□□ -2.27
TPM1P09493 AC067942.3-201ENST00000512025 362 ntBASIC0.88□□□□□ -2.27
TPM1P09493 AC011406.1-201ENST00000512440 370 ntBASIC0.88□□□□□ -2.27
TPM1P09493 RNA5SP384-201ENST00000516615 116 ntBASIC0.88□□□□□ -2.27
TPM1P09493 AC090888.2-201ENST00000559765 1144 ntBASIC0.88□□□□□ -2.27
TPM1P09493 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.88□□□□□ -2.27
TPM1P09493 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.88□□□□□ -2.27
TPM1P09493 AC078795.3-201ENST00000602913 472 ntBASIC0.88□□□□□ -2.27
TPM1P09493 AL359999.1-201ENST00000604513 294 ntBASIC0.88□□□□□ -2.27
TPM1P09493 AC105148.1-201ENST00000604961 409 ntBASIC0.88□□□□□ -2.27
TPM1P09493 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.88□□□□□ -2.27
TPM1P09493 MIR6866-201ENST00000638146 69 ntBASIC0.88□□□□□ -2.27
TPM1P09493 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
TPM1P09493 RNU6-179P-201ENST00000363350 107 ntBASIC0.87□□□□□ -2.27
TPM1P09493 RNU6-45P-201ENST00000384471 107 ntBASIC0.87□□□□□ -2.27
TPM1P09493 ELOCP4-201ENST00000420090 333 ntBASIC0.87□□□□□ -2.27
TPM1P09493 PIGFP2-201ENST00000421400 651 ntBASIC0.87□□□□□ -2.27
TPM1P09493 RPS23P5-201ENST00000495419 428 ntBASIC0.87□□□□□ -2.27
TPM1P09493 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
TPM1P09493 AP003181.2-201ENST00000528941 181 ntBASIC0.87□□□□□ -2.27
TPM1P09493 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.87□□□□□ -2.27
TPM1P09493 AC080078.3-201ENST00000605407 463 ntBASIC0.87□□□□□ -2.27
TPM1P09493 AC106800.4-201ENST00000614905 153 ntBASIC0.87□□□□□ -2.27
TPM1P09493 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.87□□□□□ -2.27
TPM1P09493 AL607023.1-201ENST00000620045 248 ntBASIC0.87□□□□□ -2.27
TPM1P09493 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms