Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AL133393.1-201ENST00000603277 287 ntBASIC3.07□□□□□ -1.92
RHOP08100 MTND4LP5-201ENST00000605152 292 ntBASIC3.07□□□□□ -1.92
RHOP08100 U1.23-201ENST00000610293 146 ntBASIC3.07□□□□□ -1.92
RHOP08100 RNU1-68P-201ENST00000615382 146 ntBASIC3.07□□□□□ -1.92
RHOP08100 U1.39-201ENST00000621562 146 ntBASIC3.07□□□□□ -1.92
RHOP08100 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.07□□□□□ -1.92
RHOP08100 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.07□□□□□ -1.92
RHOP08100 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.07□□□□□ -1.92
RHOP08100 RNU6-799P-201ENST00000363567 107 ntBASIC3.06□□□□□ -1.92
RHOP08100 SNORD115-32-201ENST00000364079 82 ntBASIC3.06□□□□□ -1.92
RHOP08100 RNU6-1280P-201ENST00000365211 107 ntBASIC3.06□□□□□ -1.92
RHOP08100 Y_RNA.405-201ENST00000383979 100 ntBASIC3.06□□□□□ -1.92
RHOP08100 RNU6-968P-201ENST00000384076 107 ntBASIC3.06□□□□□ -1.92
RHOP08100 Y_RNA.451-201ENST00000384200 100 ntBASIC3.06□□□□□ -1.92
RHOP08100 SNORA51.11-201ENST00000384442 131 ntBASIC3.06□□□□□ -1.92
RHOP08100 Y_RNA.524-201ENST00000384564 100 ntBASIC3.06□□□□□ -1.92
RHOP08100 Y_RNA.561-201ENST00000384694 100 ntBASIC3.06□□□□□ -1.92
RHOP08100 RNA5SP184-201ENST00000411071 108 ntBASIC3.06□□□□□ -1.92
RHOP08100 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.06□□□□□ -1.92
RHOP08100 AL714022.1-201ENST00000439897 151 ntBASIC3.06□□□□□ -1.92
RHOP08100 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.06□□□□□ -1.92
RHOP08100 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.06□□□□□ -1.92
RHOP08100 AC108938.1-201ENST00000451204 136 ntBASIC3.06□□□□□ -1.92
RHOP08100 OR2AQ1P-201ENST00000451972 200 ntBASIC3.06□□□□□ -1.92
RHOP08100 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.06□□□□□ -1.92
RHOP08100 RPS26P21-201ENST00000475397 348 ntBASIC3.06□□□□□ -1.92
RHOP08100 RN7SL429P-201ENST00000479090 223 ntBASIC3.06□□□□□ -1.92
RHOP08100 RN7SL489P-201ENST00000486185 223 ntBASIC3.06□□□□□ -1.92
RHOP08100 RN7SL327P-201ENST00000488659 223 ntBASIC3.06□□□□□ -1.92
RHOP08100 AL136360.1-201ENST00000503377 1900 ntBASIC3.06□□□□□ -1.92
RHOP08100 Y_RNA.706-201ENST00000516933 99 ntBASIC3.06□□□□□ -1.92
RHOP08100 MIR2355-201ENST00000517199 87 ntBASIC3.06□□□□□ -1.92
RHOP08100 SNORA31.23-201ENST00000517219 133 ntBASIC3.06□□□□□ -1.92
RHOP08100 CKS1BP7-201ENST00000522230 235 ntBASIC3.06□□□□□ -1.92
RHOP08100 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.06□□□□□ -1.92
RHOP08100 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.06□□□□□ -1.92
RHOP08100 AC096644.4-201ENST00000563417 2912 ntBASIC3.06□□□□□ -1.92
RHOP08100 AC009163.5-201ENST00000575421 637 ntBASIC3.06□□□□□ -1.92
RHOP08100 RAC1P9-201ENST00000604990 392 ntBASIC3.06□□□□□ -1.92
RHOP08100 AC019159.1-201ENST00000605094 187 ntBASIC3.06□□□□□ -1.92
RHOP08100 RPL23AP88-201ENST00000605759 454 ntBASIC3.06□□□□□ -1.92
RHOP08100 AC233981.2-201ENST00000611524 1614 ntBASIC3.06□□□□□ -1.92
RHOP08100 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.06□□□□□ -1.92
RHOP08100 RN7SL853P-201ENST00000617250 223 ntBASIC3.06□□□□□ -1.92
RHOP08100 AL159153.1-201ENST00000619688 317 ntBASIC3.06□□□□□ -1.92
RHOP08100 AP000560.1-201ENST00000624150 1937 ntBASIC3.06□□□□□ -1.92
RHOP08100 GABRG2-229ENST00000641017 3628 ntBASIC3.06□□□□□ -1.92
RHOP08100 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
RHOP08100 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.06□□□□□ -1.92
RHOP08100 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RHOP08100 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RHOP08100 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RHOP08100 MAPK10-322ENST00000641485 4530 ntBASIC3.05□□□□□ -1.92
RHOP08100 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RHOP08100 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RHOP08100 AC062016.1-201ENST00000355719 319 ntBASIC3.05□□□□□ -1.92
RHOP08100 SNORD56.1-201ENST00000362913 68 ntBASIC3.05□□□□□ -1.92
RHOP08100 RNU6-238P-201ENST00000363313 106 ntBASIC3.05□□□□□ -1.92
RHOP08100 RNA5SP126-201ENST00000365092 109 ntBASIC3.05□□□□□ -1.92
RHOP08100 SNORA9.2-201ENST00000365361 133 ntBASIC3.05□□□□□ -1.92
RHOP08100 RNU6-1027P-201ENST00000383998 107 ntBASIC3.05□□□□□ -1.92
RHOP08100 RNU6-301P-201ENST00000384277 107 ntBASIC3.05□□□□□ -1.92
RHOP08100 RNU6-843P-201ENST00000384454 104 ntBASIC3.05□□□□□ -1.92
RHOP08100 RPL32P35-201ENST00000415214 394 ntBASIC3.05□□□□□ -1.92
RHOP08100 TRIAP1P1-201ENST00000427062 225 ntBASIC3.05□□□□□ -1.92
RHOP08100 AC087499.2-201ENST00000432861 149 ntBASIC3.05□□□□□ -1.92
RHOP08100 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.05□□□□□ -1.92
RHOP08100 AC010099.1-201ENST00000455434 375 ntBASIC3.05□□□□□ -1.92
RHOP08100 AC006483.1-201ENST00000487308 313 ntBASIC3.05□□□□□ -1.92
RHOP08100 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.05□□□□□ -1.92
RHOP08100 AC110588.1-201ENST00000559699 137 ntBASIC3.05□□□□□ -1.92
RHOP08100 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.05□□□□□ -1.92
RHOP08100 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.05□□□□□ -1.92
RHOP08100 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.05□□□□□ -1.92
RHOP08100 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.05□□□□□ -1.92
RHOP08100 RPS29P30-201ENST00000600975 111 ntBASIC3.05□□□□□ -1.92
RHOP08100 MIR8062-201ENST00000621515 85 ntBASIC3.05□□□□□ -1.92
RHOP08100 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.05□□□□□ -1.92
RHOP08100 MIR3529-201ENST00000637713 78 ntBASIC3.05□□□□□ -1.92
RHOP08100 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RHOP08100 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
RHOP08100 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.04□□□□□ -1.92
RHOP08100 AC004944.1-201ENST00000517807 3059 ntBASIC3.04□□□□□ -1.92
RHOP08100 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RHOP08100 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RHOP08100 ADAM3A-203ENST00000461344 2157 ntBASIC3.04□□□□□ -1.92
RHOP08100 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.04□□□□□ -1.92
RHOP08100 RNU1-75P-201ENST00000347264 129 ntBASIC3.04□□□□□ -1.92
RHOP08100 Y_RNA.27-201ENST00000362540 103 ntBASIC3.04□□□□□ -1.92
RHOP08100 RNU1-76P-201ENST00000362903 159 ntBASIC3.04□□□□□ -1.92
RHOP08100 RNU6-805P-201ENST00000365643 106 ntBASIC3.04□□□□□ -1.92
RHOP08100 CD24P4-201ENST00000382840 243 ntBASIC3.04□□□□□ -1.92
RHOP08100 RNU6-17P-201ENST00000384245 107 ntBASIC3.04□□□□□ -1.92
RHOP08100 RNU6-18P-201ENST00000384527 107 ntBASIC3.04□□□□□ -1.92
RHOP08100 RNA5SP293-201ENST00000410527 113 ntBASIC3.04□□□□□ -1.92
RHOP08100 RN7SKP61-201ENST00000410642 295 ntBASIC3.04□□□□□ -1.92
RHOP08100 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.04□□□□□ -1.92
RHOP08100 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.04□□□□□ -1.92
RHOP08100 snoU13.30-201ENST00000458951 104 ntBASIC3.04□□□□□ -1.92
RHOP08100 AP001025.1-201ENST00000486139 332 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms