Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.59□□□□□ -2.31
CTSDP07339 AC016925.1-201ENST00000458303 298 ntBASIC0.59□□□□□ -2.31
CTSDP07339 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.59□□□□□ -2.31
CTSDP07339 AC105185.1-201ENST00000518705 535 ntBASIC0.59□□□□□ -2.31
CTSDP07339 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.59□□□□□ -2.31
CTSDP07339 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.59□□□□□ -2.31
CTSDP07339 FAM106DP-201ENST00000586416 501 ntBASIC0.59□□□□□ -2.31
CTSDP07339 HMGN1P30-201ENST00000589286 268 ntBASIC0.59□□□□□ -2.31
CTSDP07339 BNIP3P40-201ENST00000596017 556 ntBASIC0.59□□□□□ -2.31
CTSDP07339 AC012507.3-201ENST00000603556 477 ntBASIC0.59□□□□□ -2.31
CTSDP07339 AC107304.1-201ENST00000604229 296 ntBASIC0.59□□□□□ -2.31
CTSDP07339 AC013244.3-201ENST00000605614 388 ntBASIC0.59□□□□□ -2.31
CTSDP07339 AP000484.1-201ENST00000620067 1252 ntBASIC0.59□□□□□ -2.31
CTSDP07339 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.59□□□□□ -2.31
CTSDP07339 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.58□□□□□ -2.32
CTSDP07339 MTND4P14-201ENST00000435799 1354 ntBASIC0.58□□□□□ -2.32
CTSDP07339 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CTSDP07339 RNU6-1141P-201ENST00000364520 107 ntBASIC0.58□□□□□ -2.32
CTSDP07339 SNORA24.1-201ENST00000384401 135 ntBASIC0.58□□□□□ -2.32
CTSDP07339 MIR520E-201ENST00000384867 87 ntBASIC0.58□□□□□ -2.32
CTSDP07339 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.58□□□□□ -2.32
CTSDP07339 RNA5SP201-201ENST00000410316 124 ntBASIC0.58□□□□□ -2.32
CTSDP07339 RNU2-64P-201ENST00000411315 191 ntBASIC0.58□□□□□ -2.32
CTSDP07339 AL590135.1-201ENST00000422215 156 ntBASIC0.58□□□□□ -2.32
CTSDP07339 AC019205.3-201ENST00000424573 156 ntBASIC0.58□□□□□ -2.32
CTSDP07339 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.58□□□□□ -2.32
CTSDP07339 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.58□□□□□ -2.32
CTSDP07339 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.58□□□□□ -2.32
CTSDP07339 AC016700.2-201ENST00000446011 156 ntBASIC0.58□□□□□ -2.32
CTSDP07339 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.58□□□□□ -2.32
CTSDP07339 RNU7-14P-201ENST00000459331 62 ntBASIC0.58□□□□□ -2.32
CTSDP07339 RPS26P45-201ENST00000471748 340 ntBASIC0.58□□□□□ -2.32
CTSDP07339 AC015911.1-201ENST00000495111 156 ntBASIC0.58□□□□□ -2.32
CTSDP07339 AC116347.2-201ENST00000514912 523 ntBASIC0.58□□□□□ -2.32
CTSDP07339 SCARNA16.2-201ENST00000516520 172 ntBASIC0.58□□□□□ -2.32
CTSDP07339 RNU6-467P-201ENST00000517027 110 ntBASIC0.58□□□□□ -2.32
CTSDP07339 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.58□□□□□ -2.32
CTSDP07339 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.58□□□□□ -2.32
CTSDP07339 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.58□□□□□ -2.32
CTSDP07339 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.58□□□□□ -2.32
CTSDP07339 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.58□□□□□ -2.32
CTSDP07339 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.58□□□□□ -2.32
CTSDP07339 AL021879.1-201ENST00000611756 288 ntBASIC0.58□□□□□ -2.32
CTSDP07339 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.58□□□□□ -2.32
CTSDP07339 AL359740.1-201ENST00000624340 592 ntBASIC0.58□□□□□ -2.32
CTSDP07339 Z69720.2-201ENST00000624755 279 ntBASIC0.58□□□□□ -2.32
CTSDP07339 Y_RNA.97-201ENST00000363094 102 ntBASIC0.57□□□□□ -2.32
CTSDP07339 U3.9-201ENST00000363823 204 ntBASIC0.57□□□□□ -2.32
CTSDP07339 RNU6-931P-201ENST00000363850 107 ntBASIC0.57□□□□□ -2.32
CTSDP07339 Y_RNA.302-201ENST00000364997 102 ntBASIC0.57□□□□□ -2.32
CTSDP07339 RNU6-43P-201ENST00000384302 107 ntBASIC0.57□□□□□ -2.32
CTSDP07339 RNU6-39P-201ENST00000384344 107 ntBASIC0.57□□□□□ -2.32
CTSDP07339 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.57□□□□□ -2.32
CTSDP07339 RNU2-3P-201ENST00000410144 191 ntBASIC0.57□□□□□ -2.32
CTSDP07339 AC244670.1-201ENST00000436879 112 ntBASIC0.57□□□□□ -2.32
CTSDP07339 AC010531.2-201ENST00000465012 153 ntBASIC0.57□□□□□ -2.32
CTSDP07339 MTCO2P29-201ENST00000465212 189 ntBASIC0.57□□□□□ -2.32
CTSDP07339 RBBP4P6-201ENST00000508098 202 ntBASIC0.57□□□□□ -2.32
CTSDP07339 MTND3P25-201ENST00000509243 135 ntBASIC0.57□□□□□ -2.32
CTSDP07339 AC117522.1-201ENST00000509821 380 ntBASIC0.57□□□□□ -2.32
CTSDP07339 AC074344.1-201ENST00000512823 224 ntBASIC0.57□□□□□ -2.32
CTSDP07339 RNU5F-4P-201ENST00000516581 114 ntBASIC0.57□□□□□ -2.32
CTSDP07339 MIR4709-201ENST00000577272 72 ntBASIC0.57□□□□□ -2.32
CTSDP07339 MIR3923-201ENST00000579521 83 ntBASIC0.57□□□□□ -2.32
CTSDP07339 MIR4452-201ENST00000583004 71 ntBASIC0.57□□□□□ -2.32
CTSDP07339 AC008521.1-201ENST00000587471 187 ntBASIC0.57□□□□□ -2.32
CTSDP07339 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.57□□□□□ -2.32
CTSDP07339 AC108706.1-201ENST00000611053 297 ntBASIC0.57□□□□□ -2.32
CTSDP07339 AC018630.2-201ENST00000534866 2403 ntBASIC0.57□□□□□ -2.32
CTSDP07339 RNA5SP259-201ENST00000365541 109 ntBASIC0.56□□□□□ -2.32
CTSDP07339 RNU6-809P-201ENST00000384461 107 ntBASIC0.56□□□□□ -2.32
CTSDP07339 AL117342.1-201ENST00000404861 406 ntBASIC0.56□□□□□ -2.32
CTSDP07339 RNU2-39P-201ENST00000410604 198 ntBASIC0.56□□□□□ -2.32
CTSDP07339 RNU6-293P-201ENST00000411259 106 ntBASIC0.56□□□□□ -2.32
CTSDP07339 RNU6-607P-201ENST00000411283 108 ntBASIC0.56□□□□□ -2.32
CTSDP07339 HIGD1AP15-201ENST00000416198 280 ntBASIC0.56□□□□□ -2.32
CTSDP07339 AC004941.2-201ENST00000427009 228 ntBASIC0.56□□□□□ -2.32
CTSDP07339 AC010975.2-201ENST00000427781 588 ntBASIC0.56□□□□□ -2.32
CTSDP07339 MED13P1-201ENST00000428342 171 ntBASIC0.56□□□□□ -2.32
CTSDP07339 CALM2P2-201ENST00000428512 440 ntBASIC0.56□□□□□ -2.32
CTSDP07339 RPL37P21-201ENST00000435890 276 ntBASIC0.56□□□□□ -2.32
CTSDP07339 RPS24P1-201ENST00000438550 371 ntBASIC0.56□□□□□ -2.32
CTSDP07339 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.56□□□□□ -2.32
CTSDP07339 AC073910.1-201ENST00000445047 438 ntBASIC0.56□□□□□ -2.32
CTSDP07339 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.56□□□□□ -2.32
CTSDP07339 RPS29P1-201ENST00000465274 159 ntBASIC0.56□□□□□ -2.32
CTSDP07339 SNRPGP7-201ENST00000469016 106 ntBASIC0.56□□□□□ -2.32
CTSDP07339 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.56□□□□□ -2.32
CTSDP07339 RNU6-1041P-201ENST00000516254 102 ntBASIC0.56□□□□□ -2.32
CTSDP07339 RNU6-1098P-201ENST00000516772 96 ntBASIC0.56□□□□□ -2.32
CTSDP07339 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.56□□□□□ -2.32
CTSDP07339 ZNF321P-202ENST00000550843 495 ntBASIC0.56□□□□□ -2.32
CTSDP07339 AL442163.3-201ENST00000554110 156 ntBASIC0.56□□□□□ -2.32
CTSDP07339 ZNF519P3-201ENST00000557158 1032 ntBASIC0.56□□□□□ -2.32
CTSDP07339 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.56□□□□□ -2.32
CTSDP07339 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.56□□□□□ -2.32
CTSDP07339 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.56□□□□□ -2.32
CTSDP07339 BNIP3P16-201ENST00000589779 534 ntBASIC0.56□□□□□ -2.32
CTSDP07339 AC073539.2-201ENST00000597113 165 ntBASIC0.56□□□□□ -2.32
CTSDP07339 RPL17P51-201ENST00000605218 238 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms