Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL590135.1-201ENST00000422215 156 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 SNX2P2-201ENST00000424553 323 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AC019205.3-201ENST00000424573 156 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AC084290.1-201ENST00000434995 374 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AC016700.2-201ENST00000446011 156 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AC007547.1-201ENST00000462177 490 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AC010531.2-201ENST00000465012 153 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AC015911.1-201ENST00000495111 156 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AL163195.1-201ENST00000496941 348 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AC103851.1-201ENST00000506833 274 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.78□□□□□ -2.28
HLA-DQB2P05538 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.78□□□□□ -2.28
HLA-DQB2P05538 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.78□□□□□ -2.28
HLA-DQB2P05538 NIFKP6-201ENST00000598115 845 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AL031775.1-201ENST00000607014 887 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 RNU6-87P-201ENST00000607561 108 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AC108706.1-201ENST00000611053 297 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AC099654.5-201ENST00000636479 350 ntBASIC0.78□□□□□ -2.28
HLA-DQB2P05538 AC018630.2-201ENST00000534866 2403 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
HLA-DQB2P05538 RNU6-660P-201ENST00000364566 109 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 RNU6-641P-201ENST00000384006 107 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 RNU6-533P-201ENST00000384144 107 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 MIR520E-201ENST00000384867 87 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 SNORA26.3-201ENST00000391119 136 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 AC119618.1-201ENST00000434191 222 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 AC244670.1-201ENST00000436879 112 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 PGBD4P5-201ENST00000445958 426 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 snoU13.27-201ENST00000459278 104 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 snoU109.3-201ENST00000459477 145 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 UBL5P1-201ENST00000507979 193 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 DEFB108E-201ENST00000524692 240 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 AP003181.2-201ENST00000528941 181 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.77□□□□□ -2.29
HLA-DQB2P05538 ZNF321P-202ENST00000550843 495 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.77□□□□□ -2.29
HLA-DQB2P05538 AC021231.3-201ENST00000558497 370 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 AC109446.2-201ENST00000567872 497 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.77□□□□□ -2.29
HLA-DQB2P05538 BNIP3P16-201ENST00000589779 534 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 AL157392.4-201ENST00000609756 345 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 AL031667.3-201ENST00000620124 655 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 AC136475.10-201ENST00000620253 385 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 AC019226.2-201ENST00000625973 424 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 AC006927.4-201ENST00000639187 543 ntBASIC0.77□□□□□ -2.29
HLA-DQB2P05538 AL391994.1-201ENST00000254724 282 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 RNU1-96P-201ENST00000364163 162 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
HLA-DQB2P05538 RNU6-968P-201ENST00000384076 107 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 SNORA25-201ENST00000384384 134 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 RNU6-692P-201ENST00000384496 107 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
HLA-DQB2P05538 RNU6-293P-201ENST00000411259 106 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.76□□□□□ -2.29
HLA-DQB2P05538 AC010975.2-201ENST00000427781 588 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 MTCO3P29-201ENST00000432119 779 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.76□□□□□ -2.29
HLA-DQB2P05538 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.76□□□□□ -2.29
HLA-DQB2P05538 RPL31P3-201ENST00000458430 332 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 RNU6-1098P-201ENST00000516772 96 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.76□□□□□ -2.29
HLA-DQB2P05538 AC091489.2-201ENST00000566263 604 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 MIR3664-201ENST00000579074 99 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 FAM106DP-201ENST00000586416 501 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 BNIP3P8-201ENST00000597863 560 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 AC105148.1-201ENST00000604961 409 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 CTHRC1P1-201ENST00000605383 469 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
HLA-DQB2P05538 PCGEM1.1-201ENST00000613431 131 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 MIR6504-201ENST00000613520 61 ntBASIC0.76□□□□□ -2.29
HLA-DQB2P05538 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
HLA-DQB2P05538 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
HLA-DQB2P05538 MTND4P14-201ENST00000435799 1354 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 Y_RNA.18-201ENST00000362461 102 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 SNORD32A-201ENST00000364805 84 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 SNORA29-201ENST00000384183 140 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 RNU6-387P-201ENST00000411331 105 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 HIGD1AP15-201ENST00000416198 280 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.75□□□□□ -2.29
HLA-DQB2P05538 AC004941.2-201ENST00000427009 228 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 AC069257.2-201ENST00000441819 155 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 TAF9P1-201ENST00000445421 515 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 HSPE1P13-201ENST00000451143 297 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 AC007395.1-201ENST00000451333 677 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 TAF9P2-201ENST00000454958 515 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 RN7SKP88-201ENST00000516847 250 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 AC136932.1-201ENST00000574771 208 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 AL020996.3-201ENST00000606617 222 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 7SK.8-201ENST00000612110 250 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.75□□□□□ -2.29
HLA-DQB2P05538 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
HLA-DQB2P05538 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.75□□□□□ -2.29
HLA-DQB2P05538 7SK.11-201ENST00000615477 250 ntBASIC0.75□□□□□ -2.29
HLA-DQB2P05538 AC012676.2-201ENST00000619258 186 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms