Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.39□□□□□ -2.47
APOBP04114 MTND4P32-201ENST00000437189 1237 ntBASIC-0.39□□□□□ -2.47
APOBP04114 RPL26P6-201ENST00000440913 438 ntBASIC-0.39□□□□□ -2.47
APOBP04114 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.39□□□□□ -2.47
APOBP04114 CR383656.7-201ENST00000548164 174 ntBASIC-0.39□□□□□ -2.47
APOBP04114 AL357094.1-201ENST00000603845 844 ntBASIC-0.39□□□□□ -2.47
APOBP04114 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.39□□□□□ -2.47
APOBP04114 RNU6-1226P-201ENST00000384317 107 ntBASIC-0.39□□□□□ -2.47
APOBP04114 SNORD105-201ENST00000386910 85 ntBASIC-0.39□□□□□ -2.47
APOBP04114 AC048346.1-201ENST00000510247 144 ntBASIC-0.39□□□□□ -2.47
APOBP04114 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-0.39□□□□□ -2.47
APOBP04114 AC131055.1-201ENST00000584626 316 ntBASIC-0.39□□□□□ -2.47
APOBP04114 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC-0.39□□□□□ -2.47
APOBP04114 RNU6-152P-201ENST00000384037 107 ntBASIC-0.4□□□□□ -2.47
APOBP04114 RNY1P7-201ENST00000384743 110 ntBASIC-0.4□□□□□ -2.47
APOBP04114 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.4□□□□□ -2.47
APOBP04114 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.4□□□□□ -2.47
APOBP04114 SMURF2P1-201ENST00000514992 481 ntBASIC-0.4□□□□□ -2.47
APOBP04114 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.4□□□□□ -2.47
APOBP04114 TPRKBP2-201ENST00000565969 475 ntBASIC-0.4□□□□□ -2.47
APOBP04114 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.4□□□□□ -2.47
APOBP04114 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.4□□□□□ -2.47
APOBP04114 MIR4441-201ENST00000582623 100 ntBASIC-0.4□□□□□ -2.47
APOBP04114 COX6CP10-201ENST00000416832 224 ntBASIC-0.4□□□□□ -2.47
APOBP04114 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.4□□□□□ -2.47
APOBP04114 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.4□□□□□ -2.47
APOBP04114 TXNL1P1-201ENST00000429528 554 ntBASIC-0.4□□□□□ -2.47
APOBP04114 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC-0.4□□□□□ -2.47
APOBP04114 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.4□□□□□ -2.47
APOBP04114 MTND2P4-201ENST00000445034 1004 ntBASIC-0.4□□□□□ -2.47
APOBP04114 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.4□□□□□ -2.47
APOBP04114 AC092001.1-201ENST00000453012 261 ntBASIC-0.4□□□□□ -2.47
APOBP04114 RNU1-131P-201ENST00000458943 161 ntBASIC-0.4□□□□□ -2.47
APOBP04114 AC091885.1-201ENST00000506658 268 ntBASIC-0.4□□□□□ -2.47
APOBP04114 RN7SKP256-201ENST00000517201 314 ntBASIC-0.4□□□□□ -2.47
APOBP04114 AC122134.1-202ENST00000569111 1201 ntBASIC-0.4□□□□□ -2.47
APOBP04114 AL390237.1-201ENST00000404226 1415 ntBASIC-0.4□□□□□ -2.47
APOBP04114 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.4□□□□□ -2.47
APOBP04114 SNORA80D-201ENST00000384488 135 ntBASIC-0.4□□□□□ -2.47
APOBP04114 SNORA81-201ENST00000408493 178 ntBASIC-0.4□□□□□ -2.47
APOBP04114 RNA5SP504-201ENST00000410676 117 ntBASIC-0.4□□□□□ -2.47
APOBP04114 RNU4-27P-201ENST00000410889 139 ntBASIC-0.4□□□□□ -2.47
APOBP04114 RNA5SP111-201ENST00000411386 101 ntBASIC-0.4□□□□□ -2.47
APOBP04114 USP9YP13-201ENST00000417797 480 ntBASIC-0.4□□□□□ -2.47
APOBP04114 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.4□□□□□ -2.47
APOBP04114 AC104057.1-201ENST00000515547 497 ntBASIC-0.4□□□□□ -2.47
APOBP04114 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC-0.4□□□□□ -2.47
APOBP04114 MIR3115-201ENST00000577915 68 ntBASIC-0.4□□□□□ -2.47
APOBP04114 SNRPGP20-201ENST00000604477 205 ntBASIC-0.4□□□□□ -2.47
APOBP04114 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.4□□□□□ -2.47
APOBP04114 RNU6-730P-201ENST00000383954 104 ntBASIC-0.4□□□□□ -2.47
APOBP04114 MED13P1-201ENST00000428342 171 ntBASIC-0.4□□□□□ -2.47
APOBP04114 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.4□□□□□ -2.47
APOBP04114 AC097473.1-201ENST00000508142 408 ntBASIC-0.4□□□□□ -2.47
APOBP04114 MTND5P13-201ENST00000513046 1079 ntBASIC-0.4□□□□□ -2.47
APOBP04114 MTND5P33-201ENST00000571250 1450 ntBASIC-0.4□□□□□ -2.47
APOBP04114 AL451046.2-201ENST00000403074 277 ntBASIC-0.41□□□□□ -2.47
APOBP04114 AL133475.1-201ENST00000404414 305 ntBASIC-0.41□□□□□ -2.47
APOBP04114 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.41□□□□□ -2.47
APOBP04114 AC012308.1-201ENST00000451232 178 ntBASIC-0.41□□□□□ -2.47
APOBP04114 MTCYBP43-201ENST00000513621 740 ntBASIC-0.41□□□□□ -2.47
APOBP04114 UBE2Q2P6-201ENST00000612666 153 ntBASIC-0.41□□□□□ -2.47
APOBP04114 AL365434.2-201ENST00000607979 234 ntBASIC-0.41□□□□□ -2.48
APOBP04114 AL034345.1-201ENST00000407768 123 ntBASIC-0.41□□□□□ -2.48
APOBP04114 MTND2P21-201ENST00000436242 1042 ntBASIC-0.41□□□□□ -2.48
APOBP04114 RPL39P38-201ENST00000467018 153 ntBASIC-0.41□□□□□ -2.48
APOBP04114 AL160314.1-201ENST00000490836 438 ntBASIC-0.41□□□□□ -2.48
APOBP04114 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-0.41□□□□□ -2.48
APOBP04114 MRPS36P4-201ENST00000534436 298 ntBASIC-0.41□□□□□ -2.48
APOBP04114 AC022960.3-201ENST00000619794 441 ntBASIC-0.41□□□□□ -2.48
APOBP04114 RNY4P27-201ENST00000363341 96 ntBASIC-0.42□□□□□ -2.48
APOBP04114 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.42□□□□□ -2.48
APOBP04114 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-0.42□□□□□ -2.48
APOBP04114 MTND1P17-201ENST00000448961 204 ntBASIC-0.42□□□□□ -2.48
APOBP04114 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.42□□□□□ -2.48
APOBP04114 AL355816.2-201ENST00000610049 647 ntBASIC-0.42□□□□□ -2.48
APOBP04114 RN7SL660P-201ENST00000614852 299 ntBASIC-0.42□□□□□ -2.48
APOBP04114 AC073968.1-201ENST00000618594 637 ntBASIC-0.42□□□□□ -2.48
APOBP04114 MTND5P16-201ENST00000460269 1703 ntBASIC-0.42□□□□□ -2.48
APOBP04114 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.42□□□□□ -2.48
APOBP04114 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.42□□□□□ -2.48
APOBP04114 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.42□□□□□ -2.48
APOBP04114 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.42□□□□□ -2.48
APOBP04114 AC112771.1-201ENST00000463581 102 ntBASIC-0.42□□□□□ -2.48
APOBP04114 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC-0.42□□□□□ -2.48
APOBP04114 AC004584.2-201ENST00000570407 410 ntBASIC-0.42□□□□□ -2.48
APOBP04114 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.42□□□□□ -2.48
APOBP04114 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.42□□□□□ -2.48
APOBP04114 USP9YP29-201ENST00000445112 563 ntBASIC-0.42□□□□□ -2.48
APOBP04114 AL096829.2-201ENST00000446582 742 ntBASIC-0.42□□□□□ -2.48
APOBP04114 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.42□□□□□ -2.48
APOBP04114 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.42□□□□□ -2.48
APOBP04114 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.42□□□□□ -2.48
APOBP04114 MIR3169-201ENST00000578032 83 ntBASIC-0.42□□□□□ -2.48
APOBP04114 AP001981.2-201ENST00000603241 418 ntBASIC-0.42□□□□□ -2.48
APOBP04114 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.42□□□□□ -2.48
APOBP04114 AC017104.5-201ENST00000637647 639 ntBASIC-0.42□□□□□ -2.48
APOBP04114 RNU6-925P-201ENST00000384629 104 ntBASIC-0.42□□□□□ -2.48
APOBP04114 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.42□□□□□ -2.48
APOBP04114 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms