Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
VTNP04004 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VTNP04004 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VTNP04004 RNU6-212P-201ENST00000362642 104 ntBASIC2.27□□□□□ -2.05
VTNP04004 Y_RNA.70-201ENST00000362886 110 ntBASIC2.27□□□□□ -2.05
VTNP04004 SNORD114-19-201ENST00000363072 75 ntBASIC2.27□□□□□ -2.05
VTNP04004 RNU6-486P-201ENST00000363116 107 ntBASIC2.27□□□□□ -2.05
VTNP04004 U3.13-201ENST00000364804 214 ntBASIC2.27□□□□□ -2.05
VTNP04004 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VTNP04004 RNU6-95P-201ENST00000384697 107 ntBASIC2.27□□□□□ -2.05
VTNP04004 PDCL2P1-201ENST00000419302 352 ntBASIC2.27□□□□□ -2.05
VTNP04004 AL139396.1-201ENST00000421137 167 ntBASIC2.27□□□□□ -2.05
VTNP04004 MTND3P9-201ENST00000429526 346 ntBASIC2.27□□□□□ -2.05
VTNP04004 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.27□□□□□ -2.05
VTNP04004 AP001025.1-201ENST00000486139 332 ntBASIC2.27□□□□□ -2.05
VTNP04004 RPL22P13-201ENST00000493291 347 ntBASIC2.27□□□□□ -2.05
VTNP04004 AC091951.2-201ENST00000500762 203 ntBASIC2.27□□□□□ -2.05
VTNP04004 AC116337.1-201ENST00000509680 687 ntBASIC2.27□□□□□ -2.05
VTNP04004 SNORA31.11-201ENST00000516528 139 ntBASIC2.27□□□□□ -2.05
VTNP04004 Y_RNA.702-201ENST00000516843 96 ntBASIC2.27□□□□□ -2.05
VTNP04004 TRAV32-201ENST00000553993 340 ntBASIC2.27□□□□□ -2.05
VTNP04004 AC100830.2-201ENST00000581636 240 ntBASIC2.27□□□□□ -2.05
VTNP04004 RPS15AP11-201ENST00000594193 385 ntBASIC2.27□□□□□ -2.05
VTNP04004 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.27□□□□□ -2.05
VTNP04004 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.27□□□□□ -2.05
VTNP04004 MIR6128-201ENST00000615528 109 ntBASIC2.27□□□□□ -2.05
VTNP04004 AC063943.3-201ENST00000615562 356 ntBASIC2.27□□□□□ -2.05
VTNP04004 AC092794.2-201ENST00000620933 563 ntBASIC2.27□□□□□ -2.05
VTNP04004 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VTNP04004 FO624990.1-201ENST00000636373 85 ntBASIC2.27□□□□□ -2.05
VTNP04004 Z75746.1-201ENST00000440243 2080 ntBASIC2.27□□□□□ -2.05
VTNP04004 MTND4P23-201ENST00000447723 1363 ntBASIC2.26□□□□□ -2.05
VTNP04004 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VTNP04004 Y_RNA.184-201ENST00000363884 108 ntBASIC2.26□□□□□ -2.05
VTNP04004 RNU6-306P-201ENST00000384617 107 ntBASIC2.26□□□□□ -2.05
VTNP04004 MIR521-1-201ENST00000384902 87 ntBASIC2.26□□□□□ -2.05
VTNP04004 MIR548F5-201ENST00000408421 86 ntBASIC2.26□□□□□ -2.05
VTNP04004 RNU6-325P-201ENST00000411132 105 ntBASIC2.26□□□□□ -2.05
VTNP04004 AL030996.1-201ENST00000411430 235 ntBASIC2.26□□□□□ -2.05
VTNP04004 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.26□□□□□ -2.05
VTNP04004 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.26□□□□□ -2.05
VTNP04004 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.26□□□□□ -2.05
VTNP04004 AC097463.2-201ENST00000421074 142 ntBASIC2.26□□□□□ -2.05
VTNP04004 SNAP23P1-201ENST00000433229 246 ntBASIC2.26□□□□□ -2.05
VTNP04004 AC243964.1-201ENST00000441814 261 ntBASIC2.26□□□□□ -2.05
VTNP04004 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.26□□□□□ -2.05
VTNP04004 RPL39P29-201ENST00000447779 157 ntBASIC2.26□□□□□ -2.05
VTNP04004 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.26□□□□□ -2.05
VTNP04004 AC013470.1-201ENST00000453438 462 ntBASIC2.26□□□□□ -2.05
VTNP04004 MTND1P11-201ENST00000456661 876 ntBASIC2.26□□□□□ -2.05
VTNP04004 snoU13.23-201ENST00000458863 104 ntBASIC2.26□□□□□ -2.05
VTNP04004 RNU7-26P-201ENST00000458980 63 ntBASIC2.26□□□□□ -2.05
VTNP04004 AC080013.2-201ENST00000460866 323 ntBASIC2.26□□□□□ -2.05
VTNP04004 AIG1P1-201ENST00000503376 148 ntBASIC2.26□□□□□ -2.05
VTNP04004 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.26□□□□□ -2.05
VTNP04004 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.26□□□□□ -2.05
VTNP04004 MIR4769-201ENST00000584126 77 ntBASIC2.26□□□□□ -2.05
VTNP04004 AC025754.2-201ENST00000606491 432 ntBASIC2.26□□□□□ -2.05
VTNP04004 AL022345.1-201ENST00000607292 135 ntBASIC2.26□□□□□ -2.05
VTNP04004 AC069294.1-201ENST00000608397 350 ntBASIC2.26□□□□□ -2.05
VTNP04004 AC019193.3-201ENST00000609144 554 ntBASIC2.26□□□□□ -2.05
VTNP04004 uc_338.5-201ENST00000611839 155 ntBASIC2.26□□□□□ -2.05
VTNP04004 Y_RNA.804-201ENST00000615262 101 ntBASIC2.26□□□□□ -2.05
VTNP04004 AC104260.1-201ENST00000616660 539 ntBASIC2.26□□□□□ -2.05
VTNP04004 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
VTNP04004 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VTNP04004 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
VTNP04004 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VTNP04004 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
VTNP04004 RNU6-529P-201ENST00000363383 104 ntBASIC2.25□□□□□ -2.05
VTNP04004 Y_RNA.142-201ENST00000363491 102 ntBASIC2.25□□□□□ -2.05
VTNP04004 U6atac.2-201ENST00000408644 118 ntBASIC2.25□□□□□ -2.05
VTNP04004 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.25□□□□□ -2.05
VTNP04004 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.25□□□□□ -2.05
VTNP04004 HMGB1P18-201ENST00000438801 619 ntBASIC2.25□□□□□ -2.05
VTNP04004 AC093019.1-201ENST00000443135 252 ntBASIC2.25□□□□□ -2.05
VTNP04004 IFNA11P-201ENST00000446352 526 ntBASIC2.25□□□□□ -2.05
VTNP04004 PCMTD1P1-201ENST00000455560 355 ntBASIC2.25□□□□□ -2.05
VTNP04004 U8.21-201ENST00000459536 136 ntBASIC2.25□□□□□ -2.05
VTNP04004 AC140059.1-201ENST00000489238 361 ntBASIC2.25□□□□□ -2.05
VTNP04004 MTCO1P29-201ENST00000496868 288 ntBASIC2.25□□□□□ -2.05
VTNP04004 SMURF2P1-201ENST00000514992 481 ntBASIC2.25□□□□□ -2.05
VTNP04004 RNU6-612P-201ENST00000516909 102 ntBASIC2.25□□□□□ -2.05
VTNP04004 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.25□□□□□ -2.05
VTNP04004 AP005639.2-201ENST00000527592 928 ntBASIC2.25□□□□□ -2.05
VTNP04004 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VTNP04004 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.25□□□□□ -2.05
VTNP04004 MIR5571-201ENST00000577998 113 ntBASIC2.25□□□□□ -2.05
VTNP04004 AC105245.1-201ENST00000581934 244 ntBASIC2.25□□□□□ -2.05
VTNP04004 MIR4658-201ENST00000584344 65 ntBASIC2.25□□□□□ -2.05
VTNP04004 MIR5002-201ENST00000584713 97 ntBASIC2.25□□□□□ -2.05
VTNP04004 AC091135.1-201ENST00000585943 307 ntBASIC2.25□□□□□ -2.05
VTNP04004 AL049779.4-201ENST00000604500 156 ntBASIC2.25□□□□□ -2.05
VTNP04004 MIR3976-201ENST00000606807 139 ntBASIC2.25□□□□□ -2.05
VTNP04004 HMGB1P24-202ENST00000615653 685 ntBASIC2.25□□□□□ -2.05
VTNP04004 TPTEP1-208ENST00000636884 213 ntBASIC2.25□□□□□ -2.05
VTNP04004 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
VTNP04004 Y_RNA.356-201ENST00000365475 113 ntBASIC2.24□□□□□ -2.05
VTNP04004 RNU6-622P-201ENST00000384272 103 ntBASIC2.24□□□□□ -2.05
VTNP04004 RPS29P13-201ENST00000402041 169 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms