Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MIR601-201ENST00000385256 79 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 RNU2-23P-201ENST00000410545 195 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.09□□□□□ -2.42
SPTA1P02549 USP9YP14-201ENST00000430663 563 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 HMGB1P29-201ENST00000505659 499 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 AC093259.1-201ENST00000509755 300 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 SNORD60.2-201ENST00000516883 86 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.09□□□□□ -2.42
SPTA1P02549 AL355598.1-201ENST00000604169 202 ntBASIC-0.09□□□□□ -2.42
SPTA1P02549 SEC63P2-201ENST00000503863 1939 ntBASIC-0.1□□□□□ -2.43
SPTA1P02549 MIR411-201ENST00000362239 96 ntBASIC-0.1□□□□□ -2.43
SPTA1P02549 MIR18A-201ENST00000362310 71 ntBASIC-0.1□□□□□ -2.43
SPTA1P02549 RNU4-45P-201ENST00000365469 141 ntBASIC-0.1□□□□□ -2.43
SPTA1P02549 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
SPTA1P02549 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.1□□□□□ -2.43
SPTA1P02549 MTCO2P34-201ENST00000421994 607 ntBASIC-0.1□□□□□ -2.43
SPTA1P02549 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.1□□□□□ -2.43
SPTA1P02549 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.1□□□□□ -2.43
SPTA1P02549 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.1□□□□□ -2.43
SPTA1P02549 RNU1-131P-201ENST00000458943 161 ntBASIC-0.1□□□□□ -2.43
SPTA1P02549 RNU7-21P-201ENST00000459430 62 ntBASIC-0.1□□□□□ -2.43
SPTA1P02549 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.1□□□□□ -2.43
SPTA1P02549 RNU6-528P-201ENST00000516926 100 ntBASIC-0.1□□□□□ -2.43
SPTA1P02549 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.1□□□□□ -2.43
SPTA1P02549 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.1□□□□□ -2.43
SPTA1P02549 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.1□□□□□ -2.43
SPTA1P02549 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
SPTA1P02549 MTND5P16-201ENST00000460269 1703 ntBASIC-0.1□□□□□ -2.43
SPTA1P02549 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
SPTA1P02549 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 SNORA42.1-201ENST00000363515 137 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 RNU6-1339P-201ENST00000363574 91 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 U8.7-201ENST00000364940 136 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 RNU4-48P-201ENST00000365559 182 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 SUGT1P1-201ENST00000379514 476 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 TPMTP2-201ENST00000414372 726 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 MTATP6P27-201ENST00000416987 621 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 AC016831.2-201ENST00000417179 352 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 ELOCP9-201ENST00000418624 239 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-0.11□□□□□ -2.43
SPTA1P02549 AC244098.3-201ENST00000424803 96 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 AC092427.1-201ENST00000439177 601 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 RNU6-922P-201ENST00000516753 99 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 SNORA31.19-201ENST00000517079 126 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.11□□□□□ -2.43
SPTA1P02549 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.11□□□□□ -2.43
SPTA1P02549 BNIP3P30-201ENST00000601184 574 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 AL353149.1-201ENST00000610667 244 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 RMST_4.1-201ENST00000616886 107 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 AL163051.2-201ENST00000618976 735 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 MIR8063-201ENST00000621930 81 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 SNORD3E-202ENST00000627253 216 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 AC131280.1-202ENST00000624067 4211 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 SKA2P1-201ENST00000425592 390 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.11□□□□□ -2.43
SPTA1P02549 TXNL1P1-201ENST00000429528 554 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.11□□□□□ -2.43
SPTA1P02549 AC092170.1-201ENST00000440211 356 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 AC233266.1-201ENST00000454518 96 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 TRAV32-201ENST00000553993 340 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.11□□□□□ -2.43
SPTA1P02549 MIR4431-201ENST00000579990 94 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 AC060771.1-201ENST00000582031 164 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 AC242852.1-201ENST00000612151 96 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 AC244015.1-201ENST00000622301 99 ntBASIC-0.11□□□□□ -2.43
SPTA1P02549 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
SPTA1P02549 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
SPTA1P02549 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 RNA5SP111-201ENST00000411386 101 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 MTCO3P1-205ENST00000422088 832 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 AL139421.1-201ENST00000423010 169 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 RPS15AP10-201ENST00000432472 382 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 MTND2P5-201ENST00000432656 1006 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 RPL23AP50-201ENST00000434149 455 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 AC104332.1-201ENST00000440471 797 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 snoU13.27-201ENST00000459278 104 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-0.12□□□□□ -2.43
SPTA1P02549 BNIP3P6-201ENST00000549284 499 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 AL132657.2-201ENST00000564417 358 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 MIR5695-201ENST00000579717 85 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 AC090330.1-201ENST00000588646 764 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 AC022022.2-201ENST00000602989 360 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 AC034229.4-201ENST00000607861 441 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 AL360219.1-201ENST00000610230 366 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 AC116165.2-201ENST00000616705 206 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 AL596245.1-201ENST00000618994 362 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 MIR4275-201ENST00000636486 87 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 MTCO2P8-201ENST00000412213 658 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.12□□□□□ -2.43
SPTA1P02549 AC098869.1-201ENST00000481627 292 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.12□□□□□ -2.43
SPTA1P02549 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms