Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNU6-378P-201ENST00000384324 107 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 Y_RNA.504-201ENST00000384481 104 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
HLA-DQA1P01909 RNA5SP465-201ENST00000391195 109 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AC019129.1-201ENST00000403786 261 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 MTCYBP2-201ENST00000407745 171 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 RNA5SP201-201ENST00000410316 124 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 POLHP1-201ENST00000411806 470 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.31□□□□□ -2.2
HLA-DQA1P01909 MTCO2P3-201ENST00000442543 421 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 RPL23AP6-201ENST00000446637 472 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 RNU7-138P-201ENST00000459479 64 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AC107393.1-201ENST00000512403 346 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AP005597.4-201ENST00000526762 229 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AP003034.1-201ENST00000534621 422 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.31□□□□□ -2.2
HLA-DQA1P01909 MIR3923-201ENST00000579521 83 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 PIGPP4-201ENST00000584447 307 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AL356157.2-201ENST00000605122 111 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AP000654.2-201ENST00000605633 586 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AC064836.2-201ENST00000609491 462 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AC013412.1-201ENST00000610687 192 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 SNORA43.4-201ENST00000629559 138 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 AC008555.8-201ENST00000623602 2168 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.31□□□□□ -2.2
HLA-DQA1P01909 Y_RNA.99-201ENST00000363138 105 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 RNA5SP493-201ENST00000364115 91 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 RNU4-42P-201ENST00000364738 142 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 RNU4-66P-201ENST00000365199 138 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 SNORD37.1-201ENST00000390968 65 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 SNORA26.3-201ENST00000391119 136 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 RNA5SP212-201ENST00000391223 107 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 RNU2-41P-201ENST00000410991 178 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HLA-DQA1P01909 AC244636.1-201ENST00000421152 228 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HLA-DQA1P01909 MTND2P29-201ENST00000438595 412 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DQA1P01909 MTND1P29-201ENST00000448112 647 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DQA1P01909 AC083798.1-201ENST00000472671 131 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 AC008628.2-201ENST00000502605 298 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 RNU6-189P-201ENST00000516120 101 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 RNA5SP490-201ENST00000517141 136 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 CENPUP1-201ENST00000526649 1202 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 AP005639.2-201ENST00000527592 928 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 CBX3P4-201ENST00000538909 354 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DQA1P01909 AC092747.3-201ENST00000603769 301 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 SNRPGP19-201ENST00000603826 189 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 AC005034.5-201ENST00000604219 466 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 AC245008.1-201ENST00000608123 476 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.3□□□□□ -2.2
HLA-DQA1P01909 AL121757.2-201ENST00000611223 313 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 PCGEM1.1-201ENST00000613431 131 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 AL590240.4-201ENST00000616908 390 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 AC103705.1-201ENST00000619013 241 ntBASIC1.3□□□□□ -2.2
HLA-DQA1P01909 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HLA-DQA1P01909 AC092268.1-201ENST00000342691 405 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 RNA5SP126-201ENST00000365092 109 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
HLA-DQA1P01909 CALM2P3-201ENST00000400429 449 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 AP000275.1-201ENST00000411943 390 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.29□□□□□ -2.2
HLA-DQA1P01909 HSPE1P21-201ENST00000438283 308 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.29□□□□□ -2.2
HLA-DQA1P01909 MTND3P16-201ENST00000452205 344 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 SRRM1P2-201ENST00000464531 1192 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 RPS29P21-201ENST00000496272 170 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 AC016632.1-201ENST00000503994 196 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 AC096745.1-201ENST00000509945 370 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 ATP5EP1-201ENST00000510257 156 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.29□□□□□ -2.2
HLA-DQA1P01909 RNVU1-2-201ENST00000516326 135 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 RNU6-1069P-201ENST00000516612 133 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 RNU6-835P-201ENST00000516974 104 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 RNU6-323P-201ENST00000521915 107 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 AP000889.1-201ENST00000530968 660 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 AC104581.2-201ENST00000572227 430 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 Z98751.3-201ENST00000604447 521 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.29□□□□□ -2.2
HLA-DQA1P01909 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.29□□□□□ -2.2
HLA-DQA1P01909 AC124864.2-201ENST00000624736 186 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 AP000648.3-201ENST00000623539 4507 ntBASIC1.29□□□□□ -2.2
HLA-DQA1P01909 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.29□□□□□ -2.2
HLA-DQA1P01909 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
HLA-DQA1P01909 Y_RNA.167-201ENST00000363735 109 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 RNU6-1322P-201ENST00000364309 107 ntBASIC1.28□□□□□ -2.2
HLA-DQA1P01909 RNU4-56P-201ENST00000364700 142 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms