Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RPL30P12-201ENST00000474666 353 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 HMGN1P13-201ENST00000505795 138 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.33□□□□□ -2.04
CLPTM1O96005 AC091874.1-201ENST00000511402 339 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 SNORA25.11-201ENST00000515935 105 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 RNA5SP282-201ENST00000516355 108 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 RNU6-1153P-201ENST00000516760 105 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.33□□□□□ -2.04
CLPTM1O96005 AP000889.1-201ENST00000530968 660 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CLPTM1O96005 MIR4319-201ENST00000577285 85 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 BNIP3P16-201ENST00000589779 534 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 AP001836.1-201ENST00000604675 523 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 AL160413.1-201ENST00000622780 310 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 AC092608.2-201ENST00000624427 218 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 SCARNA15.3-201ENST00000626315 122 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 SCARNA4.1-201ENST00000628597 123 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 MIR3529-201ENST00000637713 78 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLPTM1O96005 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLPTM1O96005 Y_RNA.48-201ENST00000362710 103 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 RNU1-51P-201ENST00000365345 176 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 RNU6-622P-201ENST00000384272 103 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 RNU6-331P-201ENST00000384724 107 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 MIR544A-201ENST00000384855 91 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 AL356057.3-201ENST00000402607 340 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 RNA5SP21-201ENST00000410917 96 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 RNU6-1245P-201ENST00000411130 106 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 RPS20P15-201ENST00000412792 311 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 MTND1P14-201ENST00000427400 950 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.32□□□□□ -2.04
CLPTM1O96005 AC108938.1-201ENST00000451204 136 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 Y_RNA.653-201ENST00000459091 95 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 AC005741.1-201ENST00000511094 432 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 ACA59.1-201ENST00000515966 143 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 SCARNA17.1-201ENST00000516211 143 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 SNORA31.6-201ENST00000516241 130 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 SCARNA17.2-201ENST00000516334 143 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 SCARNA16.2-201ENST00000516520 172 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.32□□□□□ -2.04
CLPTM1O96005 AC090897.2-201ENST00000581715 130 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 MIR5690-201ENST00000583739 73 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 MIR8076-201ENST00000611401 83 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 SCARNA17.4-201ENST00000614296 143 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 MIR7515-201ENST00000637837 67 ntBASIC2.32□□□□□ -2.04
CLPTM1O96005 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLPTM1O96005 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
CLPTM1O96005 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.32□□□□□ -2.04
CLPTM1O96005 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.31□□□□□ -2.04
CLPTM1O96005 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLPTM1O96005 RNU6-227P-201ENST00000362865 103 ntBASIC2.31□□□□□ -2.04
CLPTM1O96005 Y_RNA.123-201ENST00000363338 102 ntBASIC2.31□□□□□ -2.04
CLPTM1O96005 RNU6-890P-201ENST00000384121 107 ntBASIC2.31□□□□□ -2.04
CLPTM1O96005 SNORA11.2-201ENST00000408318 127 ntBASIC2.31□□□□□ -2.04
CLPTM1O96005 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.31□□□□□ -2.04
CLPTM1O96005 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.31□□□□□ -2.04
CLPTM1O96005 BX276092.3-201ENST00000424182 230 ntBASIC2.31□□□□□ -2.04
CLPTM1O96005 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.31□□□□□ -2.04
CLPTM1O96005 AC124916.1-201ENST00000444020 547 ntBASIC2.31□□□□□ -2.04
CLPTM1O96005 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.31□□□□□ -2.04
CLPTM1O96005 RNU6-120P-201ENST00000516077 103 ntBASIC2.31□□□□□ -2.04
CLPTM1O96005 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.31□□□□□ -2.04
CLPTM1O96005 AC078795.3-201ENST00000602913 472 ntBASIC2.31□□□□□ -2.04
CLPTM1O96005 AC018889.1-201ENST00000605372 397 ntBASIC2.31□□□□□ -2.04
CLPTM1O96005 AC024581.2-201ENST00000619986 252 ntBASIC2.31□□□□□ -2.04
CLPTM1O96005 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.31□□□□□ -2.04
CLPTM1O96005 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.31□□□□□ -2.04
CLPTM1O96005 AC062016.1-201ENST00000355719 319 ntBASIC2.3□□□□□ -2.04
CLPTM1O96005 Y_RNA.315-201ENST00000365117 102 ntBASIC2.3□□□□□ -2.04
CLPTM1O96005 RNU6-43P-201ENST00000384302 107 ntBASIC2.3□□□□□ -2.04
CLPTM1O96005 Y_RNA.510-201ENST00000384511 114 ntBASIC2.3□□□□□ -2.04
CLPTM1O96005 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CLPTM1O96005 AP000275.1-201ENST00000411943 390 ntBASIC2.3□□□□□ -2.04
CLPTM1O96005 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.3□□□□□ -2.04
CLPTM1O96005 ARL5AP4-201ENST00000430731 512 ntBASIC2.3□□□□□ -2.04
CLPTM1O96005 AC007677.1-201ENST00000445757 515 ntBASIC2.3□□□□□ -2.04
CLPTM1O96005 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.3□□□□□ -2.04
CLPTM1O96005 MIR2053-201ENST00000459295 91 ntBASIC2.3□□□□□ -2.04
CLPTM1O96005 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.3□□□□□ -2.04
CLPTM1O96005 AC093303.1-201ENST00000514549 295 ntBASIC2.3□□□□□ -2.04
CLPTM1O96005 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.3□□□□□ -2.04
CLPTM1O96005 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.3□□□□□ -2.04
CLPTM1O96005 AC093249.1-201ENST00000567049 203 ntBASIC2.3□□□□□ -2.04
CLPTM1O96005 VN1R107P-201ENST00000601784 209 ntBASIC2.3□□□□□ -2.04
CLPTM1O96005 AC080078.3-201ENST00000605407 463 ntBASIC2.3□□□□□ -2.04
CLPTM1O96005 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.3□□□□□ -2.04
CLPTM1O96005 HAUS6P2-201ENST00000433254 2404 ntBASIC2.3□□□□□ -2.04
CLPTM1O96005 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.3□□□□□ -2.04
CLPTM1O96005 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CLPTM1O96005 AC009541.1-201ENST00000438279 2662 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CLPTM1O96005 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CLPTM1O96005 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLPTM1O96005 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CLPTM1O96005 MIR21-201ENST00000362134 72 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 SNORD50.1-201ENST00000362987 71 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 Y_RNA.111-201ENST00000363248 100 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms