Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC010297.1-201ENST00000623948 149 ntBASIC2.24□□□□□ -2.05
CLDN1O95832 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.24□□□□□ -2.05
CLDN1O95832 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
CLDN1O95832 KPNA2P1-201ENST00000458289 1591 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN1O95832 Y_RNA.11-201ENST00000362375 109 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 SNORD32A-201ENST00000364805 84 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 SET-203ENST00000372688 801 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN1O95832 Y_RNA.384-201ENST00000383909 102 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 RNU6-306P-201ENST00000384617 107 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 MTCYBP4-201ENST00000401524 249 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 AL513475.1-201ENST00000406602 315 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 RNU6-174P-201ENST00000410406 106 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 RNU6-370P-201ENST00000411008 104 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 CYCSP48-201ENST00000417124 323 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN1O95832 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN1O95832 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN1O95832 PCMTD1P1-201ENST00000455560 355 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN1O95832 AC018437.1-201ENST00000492214 406 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 SNORA31.6-201ENST00000516241 130 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 AP005902.1-201ENST00000521358 186 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN1O95832 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN1O95832 FRG2DP-202ENST00000566967 323 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 AC090616.3-201ENST00000582184 217 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 AC011494.1-201ENST00000596454 237 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 MIR8076-201ENST00000611401 83 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN1O95832 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 AC097372.5-201ENST00000623665 376 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 FO624990.1-201ENST00000636373 85 ntBASIC2.23□□□□□ -2.05
CLDN1O95832 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN1O95832 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
CLDN1O95832 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CLDN1O95832 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN1O95832 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN1O95832 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN1O95832 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN1O95832 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CLDN1O95832 RNU6-858P-201ENST00000362436 107 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 RNU6-1010P-201ENST00000362757 107 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 RNU6-227P-201ENST00000362865 103 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 Y_RNA.67-201ENST00000362870 100 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 SNORD56.1-201ENST00000362913 68 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 RNU6-1159P-201ENST00000362933 107 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 RNU6-842P-201ENST00000384269 107 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 RNU6-692P-201ENST00000384496 107 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 RNY4P36-201ENST00000391116 96 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 AL591034.2-201ENST00000402839 359 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 Y_RNA.594-201ENST00000410373 140 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN1O95832 USP9YP30-201ENST00000430729 455 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 AL591043.1-201ENST00000432461 424 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN1O95832 AC096638.1-201ENST00000444678 216 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN1O95832 AP000705.1-201ENST00000454567 350 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 snoU13.14-201ENST00000459372 104 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 GZMAP1-201ENST00000503054 631 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 AC114801.2-201ENST00000503825 781 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 Y_RNA.670-201ENST00000516255 105 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 Y_RNA.675-201ENST00000516389 149 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 Y_RNA.708-201ENST00000516950 96 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 Y_RNA.718-201ENST00000517110 102 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN1O95832 MIR3670-2-201ENST00000582974 65 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 MIR3670-1-201ENST00000584160 65 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 MIR3670-3-201ENST00000584855 65 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 RPS15AP11-201ENST00000594193 385 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 AL355877.2-201ENST00000603670 358 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 AC018889.1-201ENST00000605372 397 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 AL050343.2-201ENST00000607338 280 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 AC019193.3-201ENST00000609144 554 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.22□□□□□ -2.05
CLDN1O95832 MIR3670-4-201ENST00000612260 65 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 AL159153.1-201ENST00000619688 317 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 AC024581.2-201ENST00000619986 252 ntBASIC2.22□□□□□ -2.05
CLDN1O95832 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CLDN1O95832 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.22□□□□□ -2.05
CLDN1O95832 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
CLDN1O95832 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
CLDN1O95832 Y_RNA.58-201ENST00000362807 102 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 RNA5SP393-201ENST00000363423 117 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 RNU6-527P-201ENST00000363425 104 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 Y_RNA.140-201ENST00000363474 103 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 Y_RNA.154-201ENST00000363624 102 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 RNU4-76P-201ENST00000364509 141 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 RNY3P1-201ENST00000365085 102 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 RNY3-201ENST00000365484 102 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 Y_RNA.490-201ENST00000384413 102 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 RNU6-933P-201ENST00000384424 107 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 MIR147B-201ENST00000390185 80 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 RPS20P15-201ENST00000412792 311 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CLDN1O95832 AC124916.1-201ENST00000444020 547 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN1O95832 ELOCP24-201ENST00000456370 334 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms