Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 AL606923.1-201ENST00000406616 190 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 RNU4-62P-201ENST00000410125 130 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 OR9R1P-201ENST00000412200 877 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 AL158823.1-201ENST00000418441 478 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.58□□□□□ -2.16
CTDNEP1O95476 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.58□□□□□ -2.16
CTDNEP1O95476 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.58□□□□□ -2.16
CTDNEP1O95476 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.58□□□□□ -2.16
CTDNEP1O95476 MTND1P1-201ENST00000445453 368 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 RNU7-167P-201ENST00000459160 62 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 MTCO3P38-201ENST00000468910 766 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.58□□□□□ -2.16
CTDNEP1O95476 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.58□□□□□ -2.16
CTDNEP1O95476 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CTDNEP1O95476 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.58□□□□□ -2.16
CTDNEP1O95476 AC245505.1-201ENST00000556398 224 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.58□□□□□ -2.16
CTDNEP1O95476 MIR4524B-201ENST00000581569 115 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.58□□□□□ -2.16
CTDNEP1O95476 AC025754.2-201ENST00000606491 432 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 AL773524.1-201ENST00000614065 229 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 AC015540.1-201ENST00000615828 501 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 AC099654.12-201ENST00000639868 649 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 HAUS6P2-201ENST00000433254 2404 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CTDNEP1O95476 AC138393.1-203ENST00000327086 343 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 Y_RNA.3-201ENST00000362331 103 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 SNORD114-19-201ENST00000363072 75 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 RNU6-623P-201ENST00000363143 105 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 RNU6-1085P-201ENST00000363576 107 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 RNU6-105P-201ENST00000363909 104 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 RNU6-1322P-201ENST00000364309 107 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 RNU4-42P-201ENST00000364738 142 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 RNU6-483P-201ENST00000384088 108 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 MIR561-201ENST00000385216 97 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 RNA5SP450-201ENST00000411206 102 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.57□□□□□ -2.16
CTDNEP1O95476 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.57□□□□□ -2.16
CTDNEP1O95476 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.57□□□□□ -2.16
CTDNEP1O95476 AL121601.2-201ENST00000438019 707 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.57□□□□□ -2.16
CTDNEP1O95476 AC013470.1-201ENST00000453438 462 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CTDNEP1O95476 RNU6-720P-201ENST00000516363 108 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.57□□□□□ -2.16
CTDNEP1O95476 MTND4P7-201ENST00000523876 130 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 AL512360.1-201ENST00000555346 234 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 AC233702.2-202ENST00000562547 291 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 EIF1P4-201ENST00000572664 335 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.57□□□□□ -2.16
CTDNEP1O95476 MIR7974-201ENST00000615835 79 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 AL159153.1-201ENST00000619688 317 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 AL359757.2-201ENST00000624309 274 ntBASIC1.57□□□□□ -2.16
CTDNEP1O95476 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CTDNEP1O95476 RNU6-1090P-201ENST00000364065 94 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 RNU6-336P-201ENST00000364891 107 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 Y_RNA.480-201ENST00000384364 102 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 RNU1-57P-201ENST00000384491 166 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 Y_RNA.554-201ENST00000384672 102 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 AL591034.2-201ENST00000402839 359 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 RNU6-908P-201ENST00000410160 94 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 RNU6-1068P-201ENST00000410958 103 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.56□□□□□ -2.16
CTDNEP1O95476 AC138623.1-201ENST00000418060 216 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 AL117339.3-201ENST00000418733 162 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.56□□□□□ -2.16
CTDNEP1O95476 AC243964.1-201ENST00000441814 261 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 MTND3P16-201ENST00000452205 344 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.56□□□□□ -2.16
CTDNEP1O95476 RPL30P12-201ENST00000474666 353 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 AC004223.1-201ENST00000479840 271 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 HMGB1P35-201ENST00000503360 598 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.56□□□□□ -2.16
CTDNEP1O95476 SNORA4.4-201ENST00000515921 135 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 RNU6-506P-201ENST00000516553 94 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.56□□□□□ -2.16
CTDNEP1O95476 AC093249.1-201ENST00000567049 203 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 MIR3124-201ENST00000582636 67 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 VN1R80P-201ENST00000597126 338 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 AC073410.2-201ENST00000603240 332 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 AC022202.1-201ENST00000613515 211 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 MTND4P14-201ENST00000435799 1354 ntBASIC1.56□□□□□ -2.16
CTDNEP1O95476 RNU6-692P-201ENST00000384496 107 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 Y_RNA.516-201ENST00000384541 124 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 MIR514A2-201ENST00000385131 88 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 MIR514A3-201ENST00000385132 88 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 MIR758-201ENST00000390227 88 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 RNA5SP219-201ENST00000390940 113 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 RNA5SP390-201ENST00000410191 113 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 RNU2-23P-201ENST00000410545 195 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 AC244636.1-201ENST00000421152 228 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 AL365400.1-201ENST00000431854 640 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 HSPE1P21-201ENST00000438283 308 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 AL353752.1-201ENST00000454946 260 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 AL121594.1-201ENST00000475906 575 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 AC091435.1-201ENST00000505442 584 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 SNORA14.1-201ENST00000516113 141 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 RNU2-53P-201ENST00000516257 147 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms