Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MIR1294-201ENST00000408503 142 ntBASIC2.53□□□□□ -2
MBD4O95243 RNA5SP118-201ENST00000410385 109 ntBASIC2.53□□□□□ -2
MBD4O95243 RN7SKP284-201ENST00000411002 343 ntBASIC2.53□□□□□ -2
MBD4O95243 EIF1AXP1-201ENST00000419267 435 ntBASIC2.53□□□□□ -2
MBD4O95243 AC245102.2-201ENST00000448956 180 ntBASIC2.53□□□□□ -2
MBD4O95243 AC107032.1-201ENST00000485945 480 ntBASIC2.53□□□□□ -2
MBD4O95243 AC132942.1-201ENST00000486753 483 ntBASIC2.53□□□□□ -2
MBD4O95243 AC104564.1-201ENST00000493028 407 ntBASIC2.53□□□□□ -2
MBD4O95243 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.53□□□□□ -2
MBD4O95243 AC092436.3-201ENST00000511788 257 ntBASIC2.53□□□□□ -2
MBD4O95243 RPL39P5-202ENST00000512505 151 ntBASIC2.53□□□□□ -2
MBD4O95243 RNU6-965P-201ENST00000516721 96 ntBASIC2.53□□□□□ -2
MBD4O95243 AC104458.1-201ENST00000608243 463 ntBASIC2.53□□□□□ -2
MBD4O95243 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.53□□□□□ -2
MBD4O95243 AC009541.1-201ENST00000438279 2662 ntBASIC2.53□□□□□ -2.01
MBD4O95243 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
MBD4O95243 Y_RNA.89-201ENST00000363031 102 ntBASIC2.52□□□□□ -2.01
MBD4O95243 RNU6-254P-201ENST00000363377 107 ntBASIC2.52□□□□□ -2.01
MBD4O95243 SNORD32B-201ENST00000364460 84 ntBASIC2.52□□□□□ -2.01
MBD4O95243 HMGN2P39-201ENST00000398005 273 ntBASIC2.52□□□□□ -2.01
MBD4O95243 SRIP3-201ENST00000413200 219 ntBASIC2.52□□□□□ -2.01
MBD4O95243 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.52□□□□□ -2.01
MBD4O95243 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.52□□□□□ -2.01
MBD4O95243 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.52□□□□□ -2.01
MBD4O95243 AMD1P1-201ENST00000457220 922 ntBASIC2.52□□□□□ -2.01
MBD4O95243 MTCO1P29-201ENST00000496868 288 ntBASIC2.52□□□□□ -2.01
MBD4O95243 AC091874.1-201ENST00000511402 339 ntBASIC2.52□□□□□ -2.01
MBD4O95243 IGKV3-31-201ENST00000523109 329 ntBASIC2.52□□□□□ -2.01
MBD4O95243 AC026371.1-201ENST00000551867 419 ntBASIC2.52□□□□□ -2.01
MBD4O95243 RPS3AP23-202ENST00000574601 686 ntBASIC2.52□□□□□ -2.01
MBD4O95243 AC078795.3-201ENST00000602913 472 ntBASIC2.52□□□□□ -2.01
MBD4O95243 AP000654.2-201ENST00000605633 586 ntBASIC2.52□□□□□ -2.01
MBD4O95243 RMST_3.1-201ENST00000611651 109 ntBASIC2.52□□□□□ -2.01
MBD4O95243 AC022202.1-201ENST00000613515 211 ntBASIC2.52□□□□□ -2.01
MBD4O95243 AL136221.1-201ENST00000621449 509 ntBASIC2.52□□□□□ -2.01
MBD4O95243 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
MBD4O95243 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
MBD4O95243 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MBD4O95243 RNU6-1317P-201ENST00000364582 104 ntBASIC2.51□□□□□ -2.01
MBD4O95243 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
MBD4O95243 MIR29C-201ENST00000385231 88 ntBASIC2.51□□□□□ -2.01
MBD4O95243 RNU6-332P-201ENST00000391193 108 ntBASIC2.51□□□□□ -2.01
MBD4O95243 RNA5SP201-201ENST00000410316 124 ntBASIC2.51□□□□□ -2.01
MBD4O95243 AL139156.1-201ENST00000412785 841 ntBASIC2.51□□□□□ -2.01
MBD4O95243 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.51□□□□□ -2.01
MBD4O95243 ZNF885P-201ENST00000420174 1098 ntBASIC2.51□□□□□ -2.01
MBD4O95243 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.51□□□□□ -2.01
MBD4O95243 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.51□□□□□ -2.01
MBD4O95243 PRELID3BP1-201ENST00000457142 540 ntBASIC2.51□□□□□ -2.01
MBD4O95243 AC007547.1-201ENST00000462177 490 ntBASIC2.51□□□□□ -2.01
MBD4O95243 RPS29P27-201ENST00000463711 170 ntBASIC2.51□□□□□ -2.01
MBD4O95243 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.51□□□□□ -2.01
MBD4O95243 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.51□□□□□ -2.01
MBD4O95243 CYP4A27P-201ENST00000567218 190 ntBASIC2.51□□□□□ -2.01
MBD4O95243 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.51□□□□□ -2.01
MBD4O95243 Z98751.3-201ENST00000604447 521 ntBASIC2.51□□□□□ -2.01
MBD4O95243 AC090517.2-201ENST00000614966 680 ntBASIC2.51□□□□□ -2.01
MBD4O95243 SNORA43.4-201ENST00000629559 138 ntBASIC2.51□□□□□ -2.01
MBD4O95243 MIR219B-201ENST00000637023 88 ntBASIC2.51□□□□□ -2.01
MBD4O95243 AL450472.1-202ENST00000637286 180 ntBASIC2.51□□□□□ -2.01
MBD4O95243 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.51□□□□□ -2.01
MBD4O95243 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
MBD4O95243 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
MBD4O95243 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
MBD4O95243 RNU6-534P-201ENST00000364877 106 ntBASIC2.5□□□□□ -2.01
MBD4O95243 Y_RNA.453-201ENST00000384223 109 ntBASIC2.5□□□□□ -2.01
MBD4O95243 RNU6-933P-201ENST00000384424 107 ntBASIC2.5□□□□□ -2.01
MBD4O95243 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
MBD4O95243 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD4O95243 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.5□□□□□ -2.01
MBD4O95243 MTND3P9-201ENST00000429526 346 ntBASIC2.5□□□□□ -2.01
MBD4O95243 AL121890.1-201ENST00000435457 205 ntBASIC2.5□□□□□ -2.01
MBD4O95243 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.5□□□□□ -2.01
MBD4O95243 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD4O95243 RNU2-19P-201ENST00000517288 84 ntBASIC2.5□□□□□ -2.01
MBD4O95243 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD4O95243 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD4O95243 MIR5694-201ENST00000581190 76 ntBASIC2.5□□□□□ -2.01
MBD4O95243 MIR5002-201ENST00000584713 97 ntBASIC2.5□□□□□ -2.01
MBD4O95243 AL078605.1-201ENST00000603529 500 ntBASIC2.5□□□□□ -2.01
MBD4O95243 MIR3688-2-201ENST00000636963 87 ntBASIC2.5□□□□□ -2.01
MBD4O95243 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
MBD4O95243 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
MBD4O95243 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD4O95243 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
MBD4O95243 U3.9-201ENST00000363823 204 ntBASIC2.49□□□□□ -2.01
MBD4O95243 Y_RNA.295-201ENST00000364918 102 ntBASIC2.49□□□□□ -2.01
MBD4O95243 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
MBD4O95243 RNU2-2P-201ENST00000410396 191 ntBASIC2.49□□□□□ -2.01
MBD4O95243 AL030996.1-201ENST00000411430 235 ntBASIC2.49□□□□□ -2.01
MBD4O95243 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.49□□□□□ -2.01
MBD4O95243 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.49□□□□□ -2.01
MBD4O95243 AC009161.1-201ENST00000417306 376 ntBASIC2.49□□□□□ -2.01
MBD4O95243 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.49□□□□□ -2.01
MBD4O95243 C8orf59P1-201ENST00000429930 303 ntBASIC2.49□□□□□ -2.01
MBD4O95243 AC010095.1-201ENST00000443543 144 ntBASIC2.49□□□□□ -2.01
MBD4O95243 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
MBD4O95243 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.49□□□□□ -2.01
MBD4O95243 AC104435.1-201ENST00000483483 166 ntBASIC2.49□□□□□ -2.01
MBD4O95243 YWHAEP4-201ENST00000505390 198 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms