Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC109446.1-201ENST00000566172 220 ntBASIC2.4□□□□□ -2.03
NKX2-2O95096 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
NKX2-2O95096 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.4□□□□□ -2.03
NKX2-2O95096 AC113139.1-201ENST00000605049 239 ntBASIC2.4□□□□□ -2.03
NKX2-2O95096 LARP7P1-201ENST00000605576 316 ntBASIC2.4□□□□□ -2.03
NKX2-2O95096 AL132765.2-201ENST00000610812 351 ntBASIC2.4□□□□□ -2.03
NKX2-2O95096 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NKX2-2O95096 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.4□□□□□ -2.03
NKX2-2O95096 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NKX2-2O95096 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.39□□□□□ -2.03
NKX2-2O95096 RNU1-23P-201ENST00000363361 144 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 RNU6-944P-201ENST00000364023 107 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 SNORD32B-201ENST00000364460 84 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 SNORA46.1-201ENST00000391069 153 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 Y_RNA.594-201ENST00000410373 140 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 RNU6-1050P-201ENST00000410388 107 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 RNU4-14P-201ENST00000410858 122 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 AC063976.3-201ENST00000426849 329 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 CBX3P6-201ENST00000430257 527 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 AC093019.1-201ENST00000443135 252 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX2-2O95096 RPS27AP9-201ENST00000477681 438 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 AF186996.7-201ENST00000492781 209 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.39□□□□□ -2.03
NKX2-2O95096 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.39□□□□□ -2.03
NKX2-2O95096 Y_RNA.670-201ENST00000516255 105 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 RNU6-277P-201ENST00000516272 106 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 Y_RNA.708-201ENST00000516950 96 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX2-2O95096 MIR4658-201ENST00000584344 65 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 AC078899.3-201ENST00000599065 212 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 AC016727.1-205ENST00000605437 569 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 AP000654.2-201ENST00000605633 586 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 PCGEM1.1-201ENST00000613431 131 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.39□□□□□ -2.03
NKX2-2O95096 SCARNA4-201ENST00000629045 128 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 Z82209.1-201ENST00000422141 2135 ntBASIC2.39□□□□□ -2.03
NKX2-2O95096 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX2-2O95096 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NKX2-2O95096 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.38□□□□□ -2.03
NKX2-2O95096 Y_RNA.70-201ENST00000362886 110 ntBASIC2.38□□□□□ -2.03
NKX2-2O95096 MIR561-201ENST00000385216 97 ntBASIC2.38□□□□□ -2.03
NKX2-2O95096 SNORA26.7-201ENST00000391288 122 ntBASIC2.38□□□□□ -2.03
NKX2-2O95096 Y_RNA.597-201ENST00000410463 100 ntBASIC2.38□□□□□ -2.03
NKX2-2O95096 RNU2-52P-201ENST00000410680 190 ntBASIC2.38□□□□□ -2.03
NKX2-2O95096 AL139281.1-201ENST00000422120 335 ntBASIC2.38□□□□□ -2.03
NKX2-2O95096 AL358453.1-201ENST00000422522 250 ntBASIC2.38□□□□□ -2.03
NKX2-2O95096 AP000705.1-201ENST00000454567 350 ntBASIC2.38□□□□□ -2.03
NKX2-2O95096 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX2-2O95096 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.38□□□□□ -2.03
NKX2-2O95096 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX2-2O95096 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.38□□□□□ -2.03
NKX2-2O95096 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX2-2O95096 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.38□□□□□ -2.03
NKX2-2O95096 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
NKX2-2O95096 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
NKX2-2O95096 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
NKX2-2O95096 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.37□□□□□ -2.03
NKX2-2O95096 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-2O95096 KPNA2P1-201ENST00000458289 1591 ntBASIC2.37□□□□□ -2.03
NKX2-2O95096 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-2O95096 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-2O95096 AC062016.1-201ENST00000355719 319 ntBASIC2.37□□□□□ -2.03
NKX2-2O95096 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NKX2-2O95096 RNA5SP494-201ENST00000410653 129 ntBASIC2.37□□□□□ -2.03
NKX2-2O95096 AC243428.1-201ENST00000421099 264 ntBASIC2.37□□□□□ -2.03
NKX2-2O95096 AL353705.4-201ENST00000449661 238 ntBASIC2.37□□□□□ -2.03
NKX2-2O95096 FO393415.2-201ENST00000480085 343 ntBASIC2.37□□□□□ -2.03
NKX2-2O95096 SRIP1-201ENST00000489235 288 ntBASIC2.37□□□□□ -2.03
NKX2-2O95096 AC018868.1-201ENST00000491307 315 ntBASIC2.37□□□□□ -2.03
NKX2-2O95096 RPL23AP75-201ENST00000491601 451 ntBASIC2.37□□□□□ -2.03
NKX2-2O95096 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.37□□□□□ -2.03
NKX2-2O95096 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.37□□□□□ -2.03
NKX2-2O95096 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.37□□□□□ -2.03
NKX2-2O95096 RNA5SP356-201ENST00000515972 94 ntBASIC2.37□□□□□ -2.03
NKX2-2O95096 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.37□□□□□ -2.03
NKX2-2O95096 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.37□□□□□ -2.03
NKX2-2O95096 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.37□□□□□ -2.03
NKX2-2O95096 RPS3AP23-202ENST00000574601 686 ntBASIC2.37□□□□□ -2.03
NKX2-2O95096 MIR4273-201ENST00000582824 84 ntBASIC2.37□□□□□ -2.03
NKX2-2O95096 AC009229.3-201ENST00000608056 282 ntBASIC2.37□□□□□ -2.03
NKX2-2O95096 AC137590.2-201ENST00000619709 240 ntBASIC2.37□□□□□ -2.03
NKX2-2O95096 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NKX2-2O95096 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.37□□□□□ -2.03
NKX2-2O95096 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.37□□□□□ -2.03
NKX2-2O95096 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
NKX2-2O95096 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.37□□□□□ -2.03
NKX2-2O95096 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
NKX2-2O95096 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.36□□□□□ -2.03
NKX2-2O95096 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
NKX2-2O95096 ZNF299P-201ENST00000406845 1804 ntBASIC2.36□□□□□ -2.03
NKX2-2O95096 U3.9-201ENST00000363823 204 ntBASIC2.36□□□□□ -2.03
NKX2-2O95096 SNORA38-201ENST00000363946 132 ntBASIC2.36□□□□□ -2.03
NKX2-2O95096 RNU4-9P-201ENST00000364951 139 ntBASIC2.36□□□□□ -2.03
NKX2-2O95096 Y_RNA.473-201ENST00000384333 102 ntBASIC2.36□□□□□ -2.03
NKX2-2O95096 Y_RNA.490-201ENST00000384413 102 ntBASIC2.36□□□□□ -2.03
NKX2-2O95096 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.36□□□□□ -2.03
NKX2-2O95096 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.36□□□□□ -2.03
NKX2-2O95096 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.36□□□□□ -2.03
NKX2-2O95096 EIF4A1P12-201ENST00000551910 141 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms