Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
BEST1O76090 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
BEST1O76090 Y_RNA.89-201ENST00000363031 102 ntBASIC2.3□□□□□ -2.04
BEST1O76090 RNU6-1317P-201ENST00000364582 104 ntBASIC2.3□□□□□ -2.04
BEST1O76090 RNU6-26P-201ENST00000383985 107 ntBASIC2.3□□□□□ -2.04
BEST1O76090 RNA5SP201-201ENST00000410316 124 ntBASIC2.3□□□□□ -2.04
BEST1O76090 RNA5SP118-201ENST00000410385 109 ntBASIC2.3□□□□□ -2.04
BEST1O76090 RN7SKP284-201ENST00000411002 343 ntBASIC2.3□□□□□ -2.04
BEST1O76090 AL030996.1-201ENST00000411430 235 ntBASIC2.3□□□□□ -2.04
BEST1O76090 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.3□□□□□ -2.04
BEST1O76090 AL135786.1-201ENST00000415892 214 ntBASIC2.3□□□□□ -2.04
BEST1O76090 DPH3P2-201ENST00000422618 250 ntBASIC2.3□□□□□ -2.04
BEST1O76090 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.3□□□□□ -2.04
BEST1O76090 AL645568.3-201ENST00000433683 316 ntBASIC2.3□□□□□ -2.04
BEST1O76090 AC096638.1-201ENST00000444678 216 ntBASIC2.3□□□□□ -2.04
BEST1O76090 AL353705.4-201ENST00000449661 238 ntBASIC2.3□□□□□ -2.04
BEST1O76090 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
BEST1O76090 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.3□□□□□ -2.04
BEST1O76090 AMD1P1-201ENST00000457220 922 ntBASIC2.3□□□□□ -2.04
BEST1O76090 AC007547.1-201ENST00000462177 490 ntBASIC2.3□□□□□ -2.04
BEST1O76090 AC055731.1-201ENST00000474387 401 ntBASIC2.3□□□□□ -2.04
BEST1O76090 RPL39P5-202ENST00000512505 151 ntBASIC2.3□□□□□ -2.04
BEST1O76090 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.3□□□□□ -2.04
BEST1O76090 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.3□□□□□ -2.04
BEST1O76090 MYL12BP1-201ENST00000569826 507 ntBASIC2.3□□□□□ -2.04
BEST1O76090 AC007229.1-201ENST00000590455 412 ntBASIC2.3□□□□□ -2.04
BEST1O76090 AL078605.1-201ENST00000603529 500 ntBASIC2.3□□□□□ -2.04
BEST1O76090 Z98751.3-201ENST00000604447 521 ntBASIC2.3□□□□□ -2.04
BEST1O76090 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.3□□□□□ -2.04
BEST1O76090 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.3□□□□□ -2.04
BEST1O76090 PCGEM1.1-201ENST00000613431 131 ntBASIC2.3□□□□□ -2.04
BEST1O76090 AL359314.1-201ENST00000616913 261 ntBASIC2.3□□□□□ -2.04
BEST1O76090 MIR6873-201ENST00000622788 63 ntBASIC2.3□□□□□ -2.04
BEST1O76090 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.3□□□□□ -2.04
BEST1O76090 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
BEST1O76090 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
BEST1O76090 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
BEST1O76090 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.29□□□□□ -2.04
BEST1O76090 U3.9-201ENST00000363823 204 ntBASIC2.29□□□□□ -2.04
BEST1O76090 SNORA6-201ENST00000384033 151 ntBASIC2.29□□□□□ -2.04
BEST1O76090 MIR518A2-201ENST00000384966 87 ntBASIC2.29□□□□□ -2.04
BEST1O76090 RN7SKP32-201ENST00000410167 303 ntBASIC2.29□□□□□ -2.04
BEST1O76090 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.29□□□□□ -2.04
BEST1O76090 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.29□□□□□ -2.04
BEST1O76090 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.29□□□□□ -2.04
BEST1O76090 IPO7P1-201ENST00000442031 636 ntBASIC2.29□□□□□ -2.04
BEST1O76090 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.29□□□□□ -2.04
BEST1O76090 FAM206BP-201ENST00000510179 541 ntBASIC2.29□□□□□ -2.04
BEST1O76090 PTP4A1P4-201ENST00000512479 322 ntBASIC2.29□□□□□ -2.04
BEST1O76090 RNA5SP200-201ENST00000516360 103 ntBASIC2.29□□□□□ -2.04
BEST1O76090 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
BEST1O76090 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.29□□□□□ -2.04
BEST1O76090 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.29□□□□□ -2.04
BEST1O76090 CPDP1-201ENST00000579660 283 ntBASIC2.29□□□□□ -2.04
BEST1O76090 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.29□□□□□ -2.04
BEST1O76090 RMST_3.1-201ENST00000611651 109 ntBASIC2.29□□□□□ -2.04
BEST1O76090 AC005520.5-201ENST00000613926 164 ntBASIC2.29□□□□□ -2.04
BEST1O76090 AC090517.2-201ENST00000614966 680 ntBASIC2.29□□□□□ -2.04
BEST1O76090 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.29□□□□□ -2.04
BEST1O76090 MIR1248-201ENST00000629190 106 ntBASIC2.29□□□□□ -2.04
BEST1O76090 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.29□□□□□ -2.04
BEST1O76090 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
BEST1O76090 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
BEST1O76090 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
BEST1O76090 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.28□□□□□ -2.04
BEST1O76090 RNU6-1159P-201ENST00000362933 107 ntBASIC2.28□□□□□ -2.04
BEST1O76090 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
BEST1O76090 Y_RNA.453-201ENST00000384223 109 ntBASIC2.28□□□□□ -2.04
BEST1O76090 RNU6-933P-201ENST00000384424 107 ntBASIC2.28□□□□□ -2.04
BEST1O76090 AL355497.1-201ENST00000406262 551 ntBASIC2.28□□□□□ -2.04
BEST1O76090 RNU6-325P-201ENST00000411132 105 ntBASIC2.28□□□□□ -2.04
BEST1O76090 VN1R36P-201ENST00000414936 291 ntBASIC2.28□□□□□ -2.04
BEST1O76090 AC012306.1-201ENST00000423267 114 ntBASIC2.28□□□□□ -2.04
BEST1O76090 MTND3P9-201ENST00000429526 346 ntBASIC2.28□□□□□ -2.04
BEST1O76090 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.28□□□□□ -2.04
BEST1O76090 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.28□□□□□ -2.04
BEST1O76090 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
BEST1O76090 AC096745.1-201ENST00000509945 370 ntBASIC2.28□□□□□ -2.04
BEST1O76090 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.28□□□□□ -2.04
BEST1O76090 SCARNA16.3-201ENST00000516595 184 ntBASIC2.28□□□□□ -2.04
BEST1O76090 RNA5SP402-201ENST00000517148 110 ntBASIC2.28□□□□□ -2.04
BEST1O76090 HSPE1P18-201ENST00000517602 280 ntBASIC2.28□□□□□ -2.04
BEST1O76090 EIF4A1P12-201ENST00000551910 141 ntBASIC2.28□□□□□ -2.04
BEST1O76090 RPL17P51-201ENST00000605218 238 ntBASIC2.28□□□□□ -2.04
BEST1O76090 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
BEST1O76090 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
BEST1O76090 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.05
BEST1O76090 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
BEST1O76090 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.27□□□□□ -2.05
BEST1O76090 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.27□□□□□ -2.05
BEST1O76090 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
BEST1O76090 RNU6-743P-201ENST00000364151 106 ntBASIC2.27□□□□□ -2.05
BEST1O76090 RNU6-534P-201ENST00000364877 106 ntBASIC2.27□□□□□ -2.05
BEST1O76090 SNORD14D-201ENST00000384390 87 ntBASIC2.27□□□□□ -2.05
BEST1O76090 SNORA12-201ENST00000391162 147 ntBASIC2.27□□□□□ -2.05
BEST1O76090 AL079342.1-201ENST00000401460 267 ntBASIC2.27□□□□□ -2.05
BEST1O76090 AL357139.1-201ENST00000407792 426 ntBASIC2.27□□□□□ -2.05
BEST1O76090 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.27□□□□□ -2.05
BEST1O76090 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.27□□□□□ -2.05
BEST1O76090 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms