Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 Y_RNA.105-201ENST00000363182 111 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 DEFB109C-201ENST00000382575 264 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 DEFB109B-201ENST00000382656 264 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 Y_RNA.471-201ENST00000384312 102 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 MIR518D-201ENST00000385014 87 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 SNORA12.2-201ENST00000391040 156 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 MIR1302-6-201ENST00000408466 90 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 U3.37-201ENST00000408528 213 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 RNA5SP129-201ENST00000410276 118 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 RNA5SP492-201ENST00000411330 114 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 RPL19P1-201ENST00000411635 428 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 MTCO3P19-201ENST00000415864 321 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 RPEP5-201ENST00000441137 268 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 S100A11P2-201ENST00000467589 312 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 RPS29P26-201ENST00000477483 171 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.26□□□□□ -1.89
CDKL5O76039 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.26□□□□□ -1.89
CDKL5O76039 SNORA74D-201ENST00000516404 141 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 SNORA40.15-201ENST00000516884 107 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 AC034114.1-201ENST00000520293 285 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.26□□□□□ -1.89
CDKL5O76039 MIR3200-201ENST00000580767 85 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 RPS29P30-201ENST00000600975 111 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 AC068831.7-201ENST00000616954 363 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 AC078938.1-201ENST00000620993 318 ntBASIC3.26□□□□□ -1.89
CDKL5O76039 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDKL5O76039 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.26□□□□□ -1.89
CDKL5O76039 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.25□□□□□ -1.89
CDKL5O76039 AC010615.1-201ENST00000594254 1764 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CDKL5O76039 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDKL5O76039 RNU6-778P-201ENST00000363269 103 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 RNU6-525P-201ENST00000363685 104 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 RNU6-770P-201ENST00000363929 105 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 Y_RNA.405-201ENST00000383979 100 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 Y_RNA.451-201ENST00000384200 100 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 Y_RNA.489-201ENST00000384410 101 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 Y_RNA.524-201ENST00000384564 100 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 Y_RNA.561-201ENST00000384694 100 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 UBA52P6-201ENST00000399822 382 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 MIR190B-201ENST00000401119 79 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 RNU2-38P-201ENST00000410856 79 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.25□□□□□ -1.89
CDKL5O76039 YPEL5P1-201ENST00000419731 367 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 Z98949.2-201ENST00000440996 144 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 SNORD127-201ENST00000458892 86 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 RN7SKP210-201ENST00000459176 261 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 RNU6-1132P-201ENST00000459214 107 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 SNORA43.2-201ENST00000516652 128 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 AC060766.3-201ENST00000591442 263 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 RPL23AP88-201ENST00000605759 454 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 AC130454.1-201ENST00000622948 401 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 MAPK10-322ENST00000641485 4530 ntBASIC3.25□□□□□ -1.89
CDKL5O76039 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDKL5O76039 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDKL5O76039 Y_RNA.257-201ENST00000364596 102 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 Y_RNA.358-201ENST00000365491 99 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 MIR181B1-201ENST00000385240 110 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 AL512633.1-201ENST00000399931 655 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 RNU6-1077P-201ENST00000410506 102 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 RNU6-121P-201ENST00000410525 99 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 AP000275.1-201ENST00000411943 390 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.24□□□□□ -1.89
CDKL5O76039 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.24□□□□□ -1.89
CDKL5O76039 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDKL5O76039 Z82188.1-201ENST00000436709 154 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.24□□□□□ -1.89
CDKL5O76039 AC098831.1-201ENST00000440661 216 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDKL5O76039 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.24□□□□□ -1.89
CDKL5O76039 MTATP6P7-201ENST00000453315 681 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 LINC01399-202ENST00000458450 244 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.24□□□□□ -1.89
CDKL5O76039 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.24□□□□□ -1.89
CDKL5O76039 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.24□□□□□ -1.89
CDKL5O76039 MTND1P19-201ENST00000511780 315 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 RNU6-1282P-201ENST00000516735 96 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 RNA5SP468-201ENST00000516782 93 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 RNU6-570P-201ENST00000517051 105 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 AP004607.1-201ENST00000524456 203 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.24□□□□□ -1.89
CDKL5O76039 AC010186.2-204ENST00000537668 439 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.24□□□□□ -1.89
CDKL5O76039 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.24□□□□□ -1.89
CDKL5O76039 AC104581.2-201ENST00000572227 430 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CDKL5O76039 AC241585.2-209ENST00000638217 143 ntBASIC3.24□□□□□ -1.89
CDKL5O76039 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.24□□□□□ -1.89
CDKL5O76039 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CDKL5O76039 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CDKL5O76039 OR56A5-201ENST00000340110 738 ntBASIC3.23□□□□□ -1.89
CDKL5O76039 RNU6-50P-201ENST00000362356 103 ntBASIC3.23□□□□□ -1.89
CDKL5O76039 RNU1-76P-201ENST00000362903 159 ntBASIC3.23□□□□□ -1.89
CDKL5O76039 RNU6-942P-201ENST00000363002 107 ntBASIC3.23□□□□□ -1.89
CDKL5O76039 Y_RNA.350-201ENST00000365409 98 ntBASIC3.23□□□□□ -1.89
CDKL5O76039 RNU1-73P-201ENST00000383971 164 ntBASIC3.23□□□□□ -1.89
CDKL5O76039 SNORA44-201ENST00000384584 132 ntBASIC3.23□□□□□ -1.89
CDKL5O76039 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDKL5O76039 MTCYBP2-201ENST00000407745 171 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms