Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 MIR335-201ENST00000362173 94 ntBASIC4.04□□□□□ -1.76
PRPF40AO75400 Y_RNA.40-201ENST00000362645 93 ntBASIC4.04□□□□□ -1.76
PRPF40AO75400 SNORA14A-201ENST00000364773 135 ntBASIC4.04□□□□□ -1.76
PRPF40AO75400 Y_RNA.462-201ENST00000384268 102 ntBASIC4.04□□□□□ -1.76
PRPF40AO75400 AC093578.1-201ENST00000415219 368 ntBASIC4.04□□□□□ -1.76
PRPF40AO75400 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.04□□□□□ -1.76
PRPF40AO75400 SETP5-201ENST00000437270 562 ntBASIC4.04□□□□□ -1.76
PRPF40AO75400 HMGN1P18-201ENST00000457642 277 ntBASIC4.04□□□□□ -1.76
PRPF40AO75400 snoU13.14-201ENST00000459372 104 ntBASIC4.04□□□□□ -1.76
PRPF40AO75400 RPL36AP48-201ENST00000485521 314 ntBASIC4.04□□□□□ -1.76
PRPF40AO75400 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PRPF40AO75400 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.04□□□□□ -1.76
PRPF40AO75400 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.04□□□□□ -1.76
PRPF40AO75400 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.04□□□□□ -1.76
PRPF40AO75400 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PRPF40AO75400 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF40AO75400 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
PRPF40AO75400 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PRPF40AO75400 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
PRPF40AO75400 RNU6-655P-201ENST00000362858 107 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 SNORD27-201ENST00000363981 72 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 Y_RNA.416-201ENST00000384014 113 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 RNU6-1145P-201ENST00000384246 107 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 MIR186-201ENST00000384988 86 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 CBX3P9-201ENST00000402326 552 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 RN7SKP58-201ENST00000411010 305 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 RNU5A-5P-201ENST00000411054 116 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.03□□□□□ -1.76
PRPF40AO75400 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPF40AO75400 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF40AO75400 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.03□□□□□ -1.76
PRPF40AO75400 AC010095.1-201ENST00000443543 144 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPF40AO75400 MTND1P19-201ENST00000511780 315 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 SNORA40.9-201ENST00000515895 93 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 RNU6-1338P-201ENST00000516328 91 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 Y_RNA.683-201ENST00000516508 93 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 AC104027.1-201ENST00000521887 300 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 AL356575.1-201ENST00000603008 283 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 AC141273.2-201ENST00000618989 130 ntBASIC4.03□□□□□ -1.76
PRPF40AO75400 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF40AO75400 AC091152.2-201ENST00000591628 2569 ntBASIC4.03□□□□□ -1.77
PRPF40AO75400 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF40AO75400 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.02□□□□□ -1.77
PRPF40AO75400 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.02□□□□□ -1.77
PRPF40AO75400 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.02□□□□□ -1.77
PRPF40AO75400 RNU4-90P-201ENST00000362773 141 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 RNU6-1210P-201ENST00000363775 107 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 Y_RNA.179-201ENST00000363844 90 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 RNU1-57P-201ENST00000384491 166 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 RNU6-21P-201ENST00000384710 107 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPF40AO75400 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF40AO75400 HMGN2P31-201ENST00000432430 273 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF40AO75400 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.02□□□□□ -1.77
PRPF40AO75400 AC007215.1-201ENST00000464893 276 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 RPS27P26-201ENST00000494583 239 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 RPS23P5-201ENST00000495419 428 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPF40AO75400 RNU1-95P-201ENST00000516357 160 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 RNU1-128P-201ENST00000516704 160 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 SNORD59.2-201ENST00000516873 68 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPF40AO75400 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF40AO75400 MIR3186-201ENST00000577404 85 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 AC011373.1-201ENST00000607270 237 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 AL442067.1-201ENST00000613261 223 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 AC005520.5-201ENST00000613926 164 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF40AO75400 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF40AO75400 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.02□□□□□ -1.77
PRPF40AO75400 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF40AO75400 BX322639.1-202ENST00000423987 2213 ntBASIC4.02□□□□□ -1.77
PRPF40AO75400 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF40AO75400 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
PRPF40AO75400 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF40AO75400 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF40AO75400 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPF40AO75400 SNORA73.2-201ENST00000364946 201 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 RNU6-245P-201ENST00000384020 107 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 Y_RNA.541-201ENST00000384640 113 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 MIR549A-201ENST00000385268 96 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 RNA5SP171-201ENST00000391071 115 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 DBIP2-201ENST00000419076 262 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 AIMP1P2-201ENST00000425294 312 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF40AO75400 AC117440.1-201ENST00000474107 571 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 RNU6-496P-201ENST00000516145 99 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 SNORA64.4-201ENST00000516632 81 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 RNU7-110P-201ENST00000516891 62 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 CYCSP23-201ENST00000519781 313 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPF40AO75400 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.01□□□□□ -1.77
PRPF40AO75400 MIR4444-1-201ENST00000581696 74 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 MIR4444-2-201ENST00000584390 74 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 SNRPGP20-201ENST00000604477 205 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 SNORD113-5-201ENST00000607261 78 ntBASIC4.01□□□□□ -1.77
PRPF40AO75400 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF40AO75400 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms