Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 Y_RNA.41-201ENST00000362646 102 ntBASIC1.9□□□□□ -2.11
SDC3O75056 SNORD32A-201ENST00000364805 84 ntBASIC1.9□□□□□ -2.11
SDC3O75056 RNU4-66P-201ENST00000365199 138 ntBASIC1.9□□□□□ -2.11
SDC3O75056 RNU6-43P-201ENST00000384302 107 ntBASIC1.9□□□□□ -2.11
SDC3O75056 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SDC3O75056 SNORA46.1-201ENST00000391069 153 ntBASIC1.9□□□□□ -2.11
SDC3O75056 AL512604.1-201ENST00000404812 257 ntBASIC1.9□□□□□ -2.11
SDC3O75056 AC096920.1-201ENST00000423991 241 ntBASIC1.9□□□□□ -2.11
SDC3O75056 RPS15AP10-201ENST00000432472 382 ntBASIC1.9□□□□□ -2.11
SDC3O75056 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.9□□□□□ -2.11
SDC3O75056 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.9□□□□□ -2.11
SDC3O75056 MTCO2P3-201ENST00000442543 421 ntBASIC1.9□□□□□ -2.11
SDC3O75056 AK3P2-201ENST00000507976 429 ntBASIC1.9□□□□□ -2.11
SDC3O75056 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.9□□□□□ -2.11
SDC3O75056 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.9□□□□□ -2.11
SDC3O75056 RNU6-1069P-201ENST00000516612 133 ntBASIC1.9□□□□□ -2.11
SDC3O75056 SNORD60.2-201ENST00000516883 86 ntBASIC1.9□□□□□ -2.11
SDC3O75056 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.9□□□□□ -2.11
SDC3O75056 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.9□□□□□ -2.11
SDC3O75056 AC103996.1-201ENST00000555468 102 ntBASIC1.9□□□□□ -2.11
SDC3O75056 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.9□□□□□ -2.11
SDC3O75056 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SDC3O75056 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.9□□□□□ -2.11
SDC3O75056 AC099654.12-201ENST00000639868 649 ntBASIC1.9□□□□□ -2.11
SDC3O75056 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.9□□□□□ -2.11
SDC3O75056 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.89□□□□□ -2.11
SDC3O75056 AC121333.1-201ENST00000567488 2709 ntBASIC1.89□□□□□ -2.11
SDC3O75056 Y_RNA.378-201ENST00000365652 113 ntBASIC1.89□□□□□ -2.11
SDC3O75056 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
SDC3O75056 RN7SKP61-201ENST00000410642 295 ntBASIC1.89□□□□□ -2.11
SDC3O75056 RPL23AP95-201ENST00000426806 265 ntBASIC1.89□□□□□ -2.11
SDC3O75056 AC078809.1-201ENST00000427601 140 ntBASIC1.89□□□□□ -2.11
SDC3O75056 SEPT14P3-201ENST00000439401 183 ntBASIC1.89□□□□□ -2.11
SDC3O75056 AL732372.2-207ENST00000445840 183 ntBASIC1.89□□□□□ -2.11
SDC3O75056 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.89□□□□□ -2.11
SDC3O75056 MTND3P16-201ENST00000452205 344 ntBASIC1.89□□□□□ -2.11
SDC3O75056 SEPT14P2-201ENST00000453405 183 ntBASIC1.89□□□□□ -2.11
SDC3O75056 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.89□□□□□ -2.11
SDC3O75056 RN7SKP210-201ENST00000459176 261 ntBASIC1.89□□□□□ -2.11
SDC3O75056 RNU6-1208P-201ENST00000459588 107 ntBASIC1.89□□□□□ -2.11
SDC3O75056 AC104564.1-201ENST00000493028 407 ntBASIC1.89□□□□□ -2.11
SDC3O75056 SEPT14P4-201ENST00000513445 186 ntBASIC1.89□□□□□ -2.11
SDC3O75056 RNU6-965P-201ENST00000516721 96 ntBASIC1.89□□□□□ -2.11
SDC3O75056 FO082796.1-201ENST00000523795 183 ntBASIC1.89□□□□□ -2.11
SDC3O75056 AC022616.8-201ENST00000533569 253 ntBASIC1.89□□□□□ -2.11
SDC3O75056 AC245505.1-201ENST00000556398 224 ntBASIC1.89□□□□□ -2.11
SDC3O75056 MIR3136-201ENST00000583498 78 ntBASIC1.89□□□□□ -2.11
SDC3O75056 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.89□□□□□ -2.11
SDC3O75056 AC008749.1-201ENST00000597650 306 ntBASIC1.89□□□□□ -2.11
SDC3O75056 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
SDC3O75056 AC092747.3-201ENST00000603769 301 ntBASIC1.89□□□□□ -2.11
SDC3O75056 AL132822.1-201ENST00000617063 513 ntBASIC1.89□□□□□ -2.11
SDC3O75056 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.89□□□□□ -2.11
SDC3O75056 AC068137.3-201ENST00000639191 341 ntBASIC1.89□□□□□ -2.11
SDC3O75056 AC008555.8-201ENST00000623602 2168 ntBASIC1.88□□□□□ -2.11
SDC3O75056 Y_RNA.167-201ENST00000363735 109 ntBASIC1.88□□□□□ -2.11
SDC3O75056 RNU6-944P-201ENST00000364023 107 ntBASIC1.88□□□□□ -2.11
SDC3O75056 RNA5SP160-201ENST00000364866 120 ntBASIC1.88□□□□□ -2.11
SDC3O75056 Y_RNA.318-201ENST00000365131 97 ntBASIC1.88□□□□□ -2.11
SDC3O75056 RNU6-611P-201ENST00000384276 104 ntBASIC1.88□□□□□ -2.11
SDC3O75056 RNA5SP450-201ENST00000411206 102 ntBASIC1.88□□□□□ -2.11
SDC3O75056 EIF1AXP1-201ENST00000419267 435 ntBASIC1.88□□□□□ -2.11
SDC3O75056 CBX3P6-201ENST00000430257 527 ntBASIC1.88□□□□□ -2.11
SDC3O75056 AL133396.1-201ENST00000432048 687 ntBASIC1.88□□□□□ -2.11
SDC3O75056 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.88□□□□□ -2.11
SDC3O75056 AC245102.2-201ENST00000448956 180 ntBASIC1.88□□□□□ -2.11
SDC3O75056 AC025033.1-201ENST00000463883 194 ntBASIC1.88□□□□□ -2.11
SDC3O75056 RNA5SP182-201ENST00000516064 82 ntBASIC1.88□□□□□ -2.11
SDC3O75056 Y_RNA.676-201ENST00000516393 96 ntBASIC1.88□□□□□ -2.11
SDC3O75056 RNU6-506P-201ENST00000516553 94 ntBASIC1.88□□□□□ -2.11
SDC3O75056 AC087854.1-201ENST00000519706 414 ntBASIC1.88□□□□□ -2.11
SDC3O75056 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.88□□□□□ -2.11
SDC3O75056 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.88□□□□□ -2.11
SDC3O75056 ANP32BP3-201ENST00000559213 706 ntBASIC1.88□□□□□ -2.11
SDC3O75056 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.88□□□□□ -2.11
SDC3O75056 EIF1P4-201ENST00000572664 335 ntBASIC1.88□□□□□ -2.11
SDC3O75056 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.88□□□□□ -2.11
SDC3O75056 AL162413.1-201ENST00000603198 110 ntBASIC1.88□□□□□ -2.11
SDC3O75056 AC107304.1-201ENST00000604229 296 ntBASIC1.88□□□□□ -2.11
SDC3O75056 AP001836.1-201ENST00000604675 523 ntBASIC1.88□□□□□ -2.11
SDC3O75056 AC092807.2-201ENST00000609367 243 ntBASIC1.88□□□□□ -2.11
SDC3O75056 AC063943.3-201ENST00000615562 356 ntBASIC1.88□□□□□ -2.11
SDC3O75056 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SDC3O75056 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.88□□□□□ -2.11
SDC3O75056 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SDC3O75056 RNU6-743P-201ENST00000364151 106 ntBASIC1.87□□□□□ -2.11
SDC3O75056 Y_RNA.231-201ENST00000364358 102 ntBASIC1.87□□□□□ -2.11
SDC3O75056 RNU6-142P-201ENST00000384019 107 ntBASIC1.87□□□□□ -2.11
SDC3O75056 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SDC3O75056 RNU6-780P-201ENST00000391030 104 ntBASIC1.87□□□□□ -2.11
SDC3O75056 SNORA26.3-201ENST00000391119 136 ntBASIC1.87□□□□□ -2.11
SDC3O75056 RNU6-908P-201ENST00000410160 94 ntBASIC1.87□□□□□ -2.11
SDC3O75056 AL590556.1-201ENST00000423231 483 ntBASIC1.87□□□□□ -2.11
SDC3O75056 AC244670.1-201ENST00000436879 112 ntBASIC1.87□□□□□ -2.11
SDC3O75056 AL353689.1-201ENST00000438895 199 ntBASIC1.87□□□□□ -2.11
SDC3O75056 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.87□□□□□ -2.11
SDC3O75056 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.87□□□□□ -2.11
SDC3O75056 RPL23AP7-203ENST00000449021 469 ntBASIC1.87□□□□□ -2.11
SDC3O75056 RNA5SP233-201ENST00000459153 113 ntBASIC1.87□□□□□ -2.11
SDC3O75056 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms