Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.84□□□□□ -2.27
SCN2BO60939 Y_RNA.638-201ENST00000459374 113 ntBASIC0.84□□□□□ -2.27
SCN2BO60939 SNORA70.22-201ENST00000517160 124 ntBASIC0.84□□□□□ -2.27
SCN2BO60939 AC109479.2-201ENST00000517842 174 ntBASIC0.84□□□□□ -2.27
SCN2BO60939 CBX3P8-201ENST00000532412 525 ntBASIC0.84□□□□□ -2.27
SCN2BO60939 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.84□□□□□ -2.27
SCN2BO60939 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.84□□□□□ -2.27
SCN2BO60939 AC012507.3-201ENST00000603556 477 ntBASIC0.84□□□□□ -2.27
SCN2BO60939 AL020996.3-201ENST00000606617 222 ntBASIC0.84□□□□□ -2.27
SCN2BO60939 RNU6-1123P-201ENST00000362347 106 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 Y_RNA.18-201ENST00000362461 102 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 SNORA72.2-201ENST00000365028 127 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 MIR532-201ENST00000385025 91 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 SNORA12.2-201ENST00000391040 156 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 RNA5SP201-201ENST00000410316 124 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 RN7SKP61-201ENST00000410642 295 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 RNU6-607P-201ENST00000411283 108 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 RPS27AP14-201ENST00000422868 454 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.83□□□□□ -2.28
SCN2BO60939 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.83□□□□□ -2.28
SCN2BO60939 RBBP4P6-201ENST00000508098 202 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 MTND3P25-201ENST00000509243 135 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 AF131216.2-201ENST00000512316 564 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SCN2BO60939 AC074344.1-201ENST00000512823 224 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 AC112206.4-201ENST00000515142 405 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.83□□□□□ -2.28
SCN2BO60939 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.83□□□□□ -2.28
SCN2BO60939 AC008521.1-201ENST00000587471 187 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 AL359999.1-201ENST00000604513 294 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 AL353149.1-201ENST00000610667 244 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 AL133216.2-202ENST00000634512 349 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 AC068647.2-201ENST00000637380 353 ntBASIC0.83□□□□□ -2.28
SCN2BO60939 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.83□□□□□ -2.28
SCN2BO60939 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
SCN2BO60939 AC092268.1-201ENST00000342691 405 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 MIR337-201ENST00000362281 93 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 RNY1P10-201ENST00000363268 113 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 RNU6-43P-201ENST00000384302 107 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 RNU6-636P-201ENST00000384598 107 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 MIR558-201ENST00000384920 94 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
SCN2BO60939 HIGD1AP15-201ENST00000416198 280 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 MTCO2P21-201ENST00000419780 677 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.82□□□□□ -2.28
SCN2BO60939 Z73417.1-201ENST00000447373 778 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 RNU7-34P-201ENST00000459394 64 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 AC010587.1-201ENST00000505809 469 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 RNU6-1098P-201ENST00000516772 96 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.82□□□□□ -2.28
SCN2BO60939 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.82□□□□□ -2.28
SCN2BO60939 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.82□□□□□ -2.28
SCN2BO60939 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.82□□□□□ -2.28
SCN2BO60939 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 FAM71BP1-201ENST00000604431 523 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
SCN2BO60939 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.82□□□□□ -2.28
SCN2BO60939 AC004808.1-201ENST00000627671 721 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 AC006927.4-201ENST00000639187 543 ntBASIC0.82□□□□□ -2.28
SCN2BO60939 Y_RNA.97-201ENST00000363094 102 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 MIR19B1-201ENST00000384829 87 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 AL117342.1-201ENST00000404861 406 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 AC007283.2-201ENST00000424739 197 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.81□□□□□ -2.28
SCN2BO60939 EXOSC3P1-201ENST00000448649 500 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 AC010531.2-201ENST00000465012 153 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.81□□□□□ -2.28
SCN2BO60939 RPS23P5-201ENST00000495419 428 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 AC091951.3-201ENST00000504093 246 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.81□□□□□ -2.28
SCN2BO60939 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.81□□□□□ -2.28
SCN2BO60939 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 RNU6-567P-201ENST00000516746 107 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 RNU6-856P-201ENST00000516959 98 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.81□□□□□ -2.28
SCN2BO60939 HSPE1P4-201ENST00000550617 308 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 ZNF321P-202ENST00000550843 495 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 EIF4A1P12-201ENST00000551910 141 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 AC021231.3-201ENST00000558497 370 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 VN1R107P-201ENST00000601784 209 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 PCGEM1.1-201ENST00000613431 131 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SCN2BO60939 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.81□□□□□ -2.28
SCN2BO60939 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SCN2BO60939 RNU1-76P-201ENST00000362903 159 ntBASIC0.8□□□□□ -2.28
SCN2BO60939 U3.4-201ENST00000363352 213 ntBASIC0.8□□□□□ -2.28
SCN2BO60939 RNU6-877P-201ENST00000383868 107 ntBASIC0.8□□□□□ -2.28
SCN2BO60939 SNORA26.3-201ENST00000391119 136 ntBASIC0.8□□□□□ -2.28
SCN2BO60939 RNU2-3P-201ENST00000410144 191 ntBASIC0.8□□□□□ -2.28
SCN2BO60939 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
SCN2BO60939 CYCSP33-201ENST00000414485 327 ntBASIC0.8□□□□□ -2.28
SCN2BO60939 ELOCP4-201ENST00000420090 333 ntBASIC0.8□□□□□ -2.28
SCN2BO60939 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.8□□□□□ -2.28
SCN2BO60939 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SCN2BO60939 TRBVA-201ENST00000498804 316 ntBASIC0.8□□□□□ -2.28
SCN2BO60939 AC103851.1-201ENST00000506833 274 ntBASIC0.8□□□□□ -2.28
SCN2BO60939 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.8□□□□□ -2.28
SCN2BO60939 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
SCN2BO60939 RNU2-34P-201ENST00000516534 121 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 250.7 ms