Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC006023.1-201ENST00000603944 259 ntBASIC2.13□□□□□ -2.07
SNX3O60493 Z98751.3-201ENST00000604447 521 ntBASIC2.13□□□□□ -2.07
SNX3O60493 MIR8076-201ENST00000611401 83 ntBASIC2.13□□□□□ -2.07
SNX3O60493 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.13□□□□□ -2.07
SNX3O60493 AL133216.2-202ENST00000634512 349 ntBASIC2.13□□□□□ -2.07
SNX3O60493 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
SNX3O60493 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
SNX3O60493 RNU4-56P-201ENST00000364700 142 ntBASIC2.12□□□□□ -2.07
SNX3O60493 RNU6-546P-201ENST00000383991 107 ntBASIC2.12□□□□□ -2.07
SNX3O60493 RNU6-790P-201ENST00000384479 105 ntBASIC2.12□□□□□ -2.07
SNX3O60493 MIR491-201ENST00000384877 84 ntBASIC2.12□□□□□ -2.07
SNX3O60493 MIR517A-201ENST00000385001 87 ntBASIC2.12□□□□□ -2.07
SNX3O60493 RNU6-510P-201ENST00000391239 108 ntBASIC2.12□□□□□ -2.07
SNX3O60493 RNU2-48P-201ENST00000410694 191 ntBASIC2.12□□□□□ -2.07
SNX3O60493 AL590556.1-201ENST00000423231 483 ntBASIC2.12□□□□□ -2.07
SNX3O60493 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.12□□□□□ -2.07
SNX3O60493 RBMX2P4-201ENST00000441256 376 ntBASIC2.12□□□□□ -2.07
SNX3O60493 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.12□□□□□ -2.07
SNX3O60493 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.12□□□□□ -2.07
SNX3O60493 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.12□□□□□ -2.07
SNX3O60493 AC021146.2-201ENST00000504736 556 ntBASIC2.12□□□□□ -2.07
SNX3O60493 AC234781.5-201ENST00000508429 271 ntBASIC2.12□□□□□ -2.07
SNX3O60493 AC008413.1-201ENST00000511864 177 ntBASIC2.12□□□□□ -2.07
SNX3O60493 SNORA4.4-201ENST00000515921 135 ntBASIC2.12□□□□□ -2.07
SNX3O60493 RNU6-965P-201ENST00000516721 96 ntBASIC2.12□□□□□ -2.07
SNX3O60493 RNA5SP364-201ENST00000516938 78 ntBASIC2.12□□□□□ -2.07
SNX3O60493 RNA5SP454-201ENST00000517231 127 ntBASIC2.12□□□□□ -2.07
SNX3O60493 AP005639.2-201ENST00000527592 928 ntBASIC2.12□□□□□ -2.07
SNX3O60493 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.12□□□□□ -2.07
SNX3O60493 AC011712.1-201ENST00000588959 234 ntBASIC2.12□□□□□ -2.07
SNX3O60493 uc_338.20-201ENST00000621563 178 ntBASIC2.12□□□□□ -2.07
SNX3O60493 AL137790.1-201ENST00000634283 177 ntBASIC2.12□□□□□ -2.07
SNX3O60493 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.12□□□□□ -2.07
SNX3O60493 AC009487.4-201ENST00000624969 3585 ntBASIC2.12□□□□□ -2.07
SNX3O60493 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.12□□□□□ -2.07
SNX3O60493 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.12□□□□□ -2.07
SNX3O60493 Y_RNA.72-201ENST00000362894 103 ntBASIC2.11□□□□□ -2.07
SNX3O60493 Y_RNA.160-201ENST00000363677 92 ntBASIC2.11□□□□□ -2.07
SNX3O60493 SNORA3A-201ENST00000364113 130 ntBASIC2.11□□□□□ -2.07
SNX3O60493 RNU1-91P-201ENST00000364746 163 ntBASIC2.11□□□□□ -2.07
SNX3O60493 MIR128-1-201ENST00000384921 82 ntBASIC2.11□□□□□ -2.07
SNX3O60493 MT-TL1-201ENST00000386347 75 ntBASIC2.11□□□□□ -2.07
SNX3O60493 SNORA46.1-201ENST00000391069 153 ntBASIC2.11□□□□□ -2.07
SNX3O60493 RNU6-876P-201ENST00000391295 104 ntBASIC2.11□□□□□ -2.07
SNX3O60493 SUMO2P12-201ENST00000405924 140 ntBASIC2.11□□□□□ -2.07
SNX3O60493 MTCYBP2-201ENST00000407745 171 ntBASIC2.11□□□□□ -2.07
SNX3O60493 RNA5SP201-201ENST00000410316 124 ntBASIC2.11□□□□□ -2.07
SNX3O60493 EIF1AXP1-201ENST00000419267 435 ntBASIC2.11□□□□□ -2.07
SNX3O60493 Z82205.1-201ENST00000428456 297 ntBASIC2.11□□□□□ -2.07
SNX3O60493 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.11□□□□□ -2.07
SNX3O60493 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.11□□□□□ -2.07
SNX3O60493 AC011753.1-201ENST00000451001 220 ntBASIC2.11□□□□□ -2.07
SNX3O60493 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.11□□□□□ -2.07
SNX3O60493 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.11□□□□□ -2.07
SNX3O60493 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.11□□□□□ -2.07
SNX3O60493 RNU6-667P-201ENST00000517186 102 ntBASIC2.11□□□□□ -2.07
SNX3O60493 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.11□□□□□ -2.07
SNX3O60493 MRPS36P4-201ENST00000534436 298 ntBASIC2.11□□□□□ -2.07
SNX3O60493 AC018630.3-201ENST00000542637 96 ntBASIC2.11□□□□□ -2.07
SNX3O60493 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.11□□□□□ -2.07
SNX3O60493 MIR3923-201ENST00000579521 83 ntBASIC2.11□□□□□ -2.07
SNX3O60493 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.11□□□□□ -2.07
SNX3O60493 AC022202.1-201ENST00000613515 211 ntBASIC2.11□□□□□ -2.07
SNX3O60493 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.11□□□□□ -2.07
SNX3O60493 DUXAP9-208ENST00000622815 614 ntBASIC2.11□□□□□ -2.07
SNX3O60493 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SNX3O60493 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SNX3O60493 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.11□□□□□ -2.07
SNX3O60493 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNX3O60493 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNX3O60493 CBX3P1-201ENST00000325243 554 ntBASIC2.1□□□□□ -2.07
SNX3O60493 SNORA29-201ENST00000384183 140 ntBASIC2.1□□□□□ -2.07
SNX3O60493 RNU6-306P-201ENST00000384617 107 ntBASIC2.1□□□□□ -2.07
SNX3O60493 SNORA48.2-201ENST00000390926 124 ntBASIC2.1□□□□□ -2.07
SNX3O60493 MTND3P8-201ENST00000412909 339 ntBASIC2.1□□□□□ -2.07
SNX3O60493 MTCO3P46-201ENST00000425787 232 ntBASIC2.1□□□□□ -2.07
SNX3O60493 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.1□□□□□ -2.07
SNX3O60493 IFNA11P-201ENST00000446352 526 ntBASIC2.1□□□□□ -2.07
SNX3O60493 MTND1P17-201ENST00000448961 204 ntBASIC2.1□□□□□ -2.07
SNX3O60493 AL139109.1-201ENST00000455491 297 ntBASIC2.1□□□□□ -2.07
SNX3O60493 PPP1R2P5-201ENST00000457256 603 ntBASIC2.1□□□□□ -2.07
SNX3O60493 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.1□□□□□ -2.07
SNX3O60493 RNA5SP200-201ENST00000516360 103 ntBASIC2.1□□□□□ -2.07
SNX3O60493 Y_RNA.682-201ENST00000516457 100 ntBASIC2.1□□□□□ -2.07
SNX3O60493 RNA5SP24-201ENST00000516478 95 ntBASIC2.1□□□□□ -2.07
SNX3O60493 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.1□□□□□ -2.07
SNX3O60493 AC034114.1-201ENST00000520293 285 ntBASIC2.1□□□□□ -2.07
SNX3O60493 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.1□□□□□ -2.07
SNX3O60493 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.1□□□□□ -2.07
SNX3O60493 AC022616.8-201ENST00000533569 253 ntBASIC2.1□□□□□ -2.07
SNX3O60493 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.1□□□□□ -2.07
SNX3O60493 AL161756.2-201ENST00000604597 246 ntBASIC2.1□□□□□ -2.07
SNX3O60493 AC019193.3-201ENST00000609144 554 ntBASIC2.1□□□□□ -2.07
SNX3O60493 AC135507.2-201ENST00000612443 309 ntBASIC2.1□□□□□ -2.07
SNX3O60493 AL161423.1-201ENST00000613700 262 ntBASIC2.1□□□□□ -2.07
SNX3O60493 AL365361.1-201ENST00000566942 3481 ntBASIC2.1□□□□□ -2.07
SNX3O60493 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SNX3O60493 SNORD32B-201ENST00000364460 84 ntBASIC2.09□□□□□ -2.07
SNX3O60493 RNU6-1283P-201ENST00000365314 105 ntBASIC2.09□□□□□ -2.07
SNX3O60493 RNU6-378P-201ENST00000384324 107 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms