Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AF186996.7-201ENST00000492781 209 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.48□□□□□ -2.01
ZIC3O60481 RNA5SP112-201ENST00000515937 99 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 RNA5SP356-201ENST00000515972 94 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 RNU5F-2P-201ENST00000516066 82 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 RNU6-264P-201ENST00000517134 104 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.48□□□□□ -2.01
ZIC3O60481 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.48□□□□□ -2.01
ZIC3O60481 SNRPGP18-201ENST00000553000 214 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.48□□□□□ -2.01
ZIC3O60481 RPL23AP78-201ENST00000599928 470 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 AL078605.1-201ENST00000603529 500 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 SNRPGP17-201ENST00000603780 214 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 AC091925.1-201ENST00000623204 462 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.48□□□□□ -2.01
ZIC3O60481 SCARNA15.3-201ENST00000626315 122 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 SCARNA4.1-201ENST00000628597 123 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 SCARNA4-201ENST00000629045 128 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.48□□□□□ -2.01
ZIC3O60481 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ZIC3O60481 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.48□□□□□ -2.01
ZIC3O60481 AC010329.5-201ENST00000623497 2174 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
ZIC3O60481 Y_RNA.31-201ENST00000362574 102 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 Y_RNA.111-201ENST00000363248 100 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 Y_RNA.132-201ENST00000363421 102 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 Y_RNA.252-201ENST00000364556 101 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 Y_RNA.510-201ENST00000384511 114 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 RN7SKP123-201ENST00000410732 291 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 AL590135.1-201ENST00000422215 156 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 AC019205.3-201ENST00000424573 156 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 EIF4EP4-201ENST00000424916 578 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 AC112220.1-201ENST00000434628 355 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 AC016700.2-201ENST00000446011 156 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.47□□□□□ -2.01
ZIC3O60481 AL353705.4-201ENST00000449661 238 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 RN7SKP210-201ENST00000459176 261 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 Y_RNA.631-201ENST00000459607 101 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 AL121594.1-201ENST00000475906 575 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.47□□□□□ -2.01
ZIC3O60481 AC090525.1-201ENST00000479116 478 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 AC015911.1-201ENST00000495111 156 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 SNORA31.16-201ENST00000516773 139 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 RNU6-56P-201ENST00000516986 93 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.47□□□□□ -2.01
ZIC3O60481 AC021231.3-201ENST00000558497 370 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 MIR3605-201ENST00000583214 100 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 AC010928.2-201ENST00000588017 287 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 AL353621.2-201ENST00000605340 133 ntBASIC2.47□□□□□ -2.01
ZIC3O60481 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ZIC3O60481 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.47□□□□□ -2.01
ZIC3O60481 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ZIC3O60481 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.47□□□□□ -2.01
ZIC3O60481 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ZIC3O60481 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.47□□□□□ -2.01
ZIC3O60481 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ZIC3O60481 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
ZIC3O60481 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ZIC3O60481 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ZIC3O60481 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.46□□□□□ -2.02
ZIC3O60481 OR56A5-201ENST00000340110 738 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 RNU6-655P-201ENST00000362858 107 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 RNU6-486P-201ENST00000363116 107 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 RNU6-99P-201ENST00000364721 107 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 RNU4-9P-201ENST00000364951 139 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 Y_RNA.445-201ENST00000384168 102 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 Y_RNA.496-201ENST00000384444 101 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 Y_RNA.577-201ENST00000384794 101 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 MIR548P-201ENST00000408336 84 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 RNA5SP494-201ENST00000410653 129 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
ZIC3O60481 AL139281.1-201ENST00000422120 335 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 PMCHL1-202ENST00000423102 261 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.46□□□□□ -2.02
ZIC3O60481 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.46□□□□□ -2.02
ZIC3O60481 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.46□□□□□ -2.02
ZIC3O60481 Z82188.1-201ENST00000436709 154 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.46□□□□□ -2.02
ZIC3O60481 AC108938.1-201ENST00000451204 136 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 SNORA59A-201ENST00000459326 152 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 HMGB1P35-201ENST00000503360 598 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 RNA5SP385-201ENST00000515947 110 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.46□□□□□ -2.02
ZIC3O60481 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.46□□□□□ -2.02
ZIC3O60481 AL590705.4-201ENST00000532209 134 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 ELOCP31-201ENST00000540463 467 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 AC104581.2-201ENST00000572227 430 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 AC103810.1-201ENST00000579873 453 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 MIR3136-201ENST00000583498 78 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 MIR3171-201ENST00000584270 74 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 SNORD98-201ENST00000636377 67 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 AC099654.10-201ENST00000640395 161 ntBASIC2.46□□□□□ -2.02
ZIC3O60481 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.46□□□□□ -2.02
ZIC3O60481 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ZIC3O60481 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.46□□□□□ -2.02
ZIC3O60481 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ZIC3O60481 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.45□□□□□ -2.02
ZIC3O60481 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms