Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 snosnR66.1-201ENST00000391095 99 ntBASIC2.36□□□□□ -2.03
PRKNO60260 RNA5SP390-201ENST00000410191 113 ntBASIC2.36□□□□□ -2.03
PRKNO60260 RNU2-25P-201ENST00000411041 191 ntBASIC2.36□□□□□ -2.03
PRKNO60260 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.36□□□□□ -2.03
PRKNO60260 AL513477.1-202ENST00000417061 214 ntBASIC2.36□□□□□ -2.03
PRKNO60260 AC243428.1-201ENST00000421099 264 ntBASIC2.36□□□□□ -2.03
PRKNO60260 EIF4EP2-201ENST00000422816 654 ntBASIC2.36□□□□□ -2.03
PRKNO60260 AC005534.2-201ENST00000431047 433 ntBASIC2.36□□□□□ -2.03
PRKNO60260 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.36□□□□□ -2.03
PRKNO60260 Y_RNA.639-201ENST00000458981 102 ntBASIC2.36□□□□□ -2.03
PRKNO60260 AC022447.4-201ENST00000504053 364 ntBASIC2.36□□□□□ -2.03
PRKNO60260 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.36□□□□□ -2.03
PRKNO60260 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.36□□□□□ -2.03
PRKNO60260 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.36□□□□□ -2.03
PRKNO60260 RNU6-470P-201ENST00000515954 104 ntBASIC2.36□□□□□ -2.03
PRKNO60260 SCARNA17.1-201ENST00000516211 143 ntBASIC2.36□□□□□ -2.03
PRKNO60260 SCARNA17.2-201ENST00000516334 143 ntBASIC2.36□□□□□ -2.03
PRKNO60260 RNU6-264P-201ENST00000517134 104 ntBASIC2.36□□□□□ -2.03
PRKNO60260 HSPE1P4-201ENST00000550617 308 ntBASIC2.36□□□□□ -2.03
PRKNO60260 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.36□□□□□ -2.03
PRKNO60260 AC023043.3-201ENST00000593113 385 ntBASIC2.36□□□□□ -2.03
PRKNO60260 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.36□□□□□ -2.03
PRKNO60260 CYP2C61P-201ENST00000604072 290 ntBASIC2.36□□□□□ -2.03
PRKNO60260 RPL23AP88-201ENST00000605759 454 ntBASIC2.36□□□□□ -2.03
PRKNO60260 AC009318.2-201ENST00000610917 651 ntBASIC2.36□□□□□ -2.03
PRKNO60260 SCARNA17.4-201ENST00000614296 143 ntBASIC2.36□□□□□ -2.03
PRKNO60260 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.36□□□□□ -2.03
PRKNO60260 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.36□□□□□ -2.03
PRKNO60260 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.36□□□□□ -2.03
PRKNO60260 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.36□□□□□ -2.03
PRKNO60260 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRKNO60260 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PRKNO60260 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.35□□□□□ -2.03
PRKNO60260 RNU6-212P-201ENST00000362642 104 ntBASIC2.35□□□□□ -2.03
PRKNO60260 SNORD114-30-201ENST00000364448 72 ntBASIC2.35□□□□□ -2.03
PRKNO60260 RNU6-1180P-201ENST00000364935 107 ntBASIC2.35□□□□□ -2.03
PRKNO60260 RNU6-784P-201ENST00000384330 106 ntBASIC2.35□□□□□ -2.03
PRKNO60260 Y_RNA.504-201ENST00000384481 104 ntBASIC2.35□□□□□ -2.03
PRKNO60260 SNORA41-201ENST00000384675 132 ntBASIC2.35□□□□□ -2.03
PRKNO60260 MIR518C-201ENST00000384822 101 ntBASIC2.35□□□□□ -2.03
PRKNO60260 MIR559-201ENST00000385188 96 ntBASIC2.35□□□□□ -2.03
PRKNO60260 RNU6-308P-201ENST00000390957 107 ntBASIC2.35□□□□□ -2.03
PRKNO60260 MIR548P-201ENST00000408336 84 ntBASIC2.35□□□□□ -2.03
PRKNO60260 AL358075.3-201ENST00000426289 226 ntBASIC2.35□□□□□ -2.03
PRKNO60260 Z98742.2-201ENST00000431564 187 ntBASIC2.35□□□□□ -2.03
PRKNO60260 AC079354.2-201ENST00000453523 154 ntBASIC2.35□□□□□ -2.03
PRKNO60260 AIG1P1-201ENST00000503376 148 ntBASIC2.35□□□□□ -2.03
PRKNO60260 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.35□□□□□ -2.03
PRKNO60260 SNORA25.11-201ENST00000515935 105 ntBASIC2.35□□□□□ -2.03
PRKNO60260 SNORA31.6-201ENST00000516241 130 ntBASIC2.35□□□□□ -2.03
PRKNO60260 MRPS36P4-201ENST00000534436 298 ntBASIC2.35□□□□□ -2.03
PRKNO60260 AL442663.2-201ENST00000554385 511 ntBASIC2.35□□□□□ -2.03
PRKNO60260 AC105137.2-201ENST00000569073 466 ntBASIC2.35□□□□□ -2.03
PRKNO60260 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.35□□□□□ -2.03
PRKNO60260 AC022432.1-201ENST00000595739 310 ntBASIC2.35□□□□□ -2.03
PRKNO60260 AC005014.2-201ENST00000607795 599 ntBASIC2.35□□□□□ -2.03
PRKNO60260 AC134503.1-201ENST00000633048 54 ntBASIC2.35□□□□□ -2.03
PRKNO60260 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.35□□□□□ -2.03
PRKNO60260 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
PRKNO60260 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PRKNO60260 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.34□□□□□ -2.03
PRKNO60260 MTND5P30-201ENST00000452896 1731 ntBASIC2.34□□□□□ -2.03
PRKNO60260 ZNF299P-201ENST00000406845 1804 ntBASIC2.34□□□□□ -2.03
PRKNO60260 RNU4-82P-201ENST00000362443 140 ntBASIC2.34□□□□□ -2.03
PRKNO60260 RNU6-1115P-201ENST00000362490 106 ntBASIC2.34□□□□□ -2.03
PRKNO60260 Y_RNA.31-201ENST00000362574 102 ntBASIC2.34□□□□□ -2.03
PRKNO60260 VTRNA1-1-201ENST00000363120 99 ntBASIC2.34□□□□□ -2.03
PRKNO60260 RNU6-1141P-201ENST00000364520 107 ntBASIC2.34□□□□□ -2.03
PRKNO60260 Y_RNA.326-201ENST00000365176 113 ntBASIC2.34□□□□□ -2.03
PRKNO60260 RNU6-1222P-201ENST00000384615 107 ntBASIC2.34□□□□□ -2.03
PRKNO60260 MIR627-201ENST00000384979 97 ntBASIC2.34□□□□□ -2.03
PRKNO60260 MIR27B-201ENST00000385129 97 ntBASIC2.34□□□□□ -2.03
PRKNO60260 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.34□□□□□ -2.03
PRKNO60260 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.34□□□□□ -2.03
PRKNO60260 RPL39P40-201ENST00000445481 146 ntBASIC2.34□□□□□ -2.03
PRKNO60260 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.34□□□□□ -2.03
PRKNO60260 AC112771.1-201ENST00000463581 102 ntBASIC2.34□□□□□ -2.03
PRKNO60260 AC068781.1-201ENST00000488231 618 ntBASIC2.34□□□□□ -2.03
PRKNO60260 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.34□□□□□ -2.03
PRKNO60260 Y_RNA.661-201ENST00000516003 99 ntBASIC2.34□□□□□ -2.03
PRKNO60260 RNU6-699P-201ENST00000517081 110 ntBASIC2.34□□□□□ -2.03
PRKNO60260 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.34□□□□□ -2.03
PRKNO60260 AP003072.1-201ENST00000531740 145 ntBASIC2.34□□□□□ -2.03
PRKNO60260 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.34□□□□□ -2.03
PRKNO60260 SNRPGP18-201ENST00000553000 214 ntBASIC2.34□□□□□ -2.03
PRKNO60260 AC007375.1-201ENST00000554513 578 ntBASIC2.34□□□□□ -2.03
PRKNO60260 AC020661.2-201ENST00000560114 134 ntBASIC2.34□□□□□ -2.03
PRKNO60260 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.34□□□□□ -2.03
PRKNO60260 MIR5696-201ENST00000578474 85 ntBASIC2.34□□□□□ -2.03
PRKNO60260 MIR3171-201ENST00000584270 74 ntBASIC2.34□□□□□ -2.03
PRKNO60260 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.34□□□□□ -2.03
PRKNO60260 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.34□□□□□ -2.03
PRKNO60260 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.34□□□□□ -2.03
PRKNO60260 RNU6-91P-201ENST00000607774 107 ntBASIC2.34□□□□□ -2.03
PRKNO60260 AC096772.1-201ENST00000609146 564 ntBASIC2.34□□□□□ -2.03
PRKNO60260 uc_338.22-201ENST00000622722 187 ntBASIC2.34□□□□□ -2.03
PRKNO60260 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.34□□□□□ -2.04
PRKNO60260 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.34□□□□□ -2.04
PRKNO60260 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PRKNO60260 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms