Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AC080078.3-201ENST00000605407 463 ntBASIC0.44□□□□□ -2.34
PDE6DO43924 AC009229.3-201ENST00000608056 282 ntBASIC0.44□□□□□ -2.34
PDE6DO43924 SNORD56.2-201ENST00000363242 71 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 SNORA33-201ENST00000363664 130 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 Y_RNA.363-201ENST00000365529 113 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 RNU6-969P-201ENST00000383900 105 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 RNU6-692P-201ENST00000384496 107 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 SNORA11-201ENST00000408789 128 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 RNU2-3P-201ENST00000410144 191 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 RNU6-293P-201ENST00000411259 106 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
PDE6DO43924 AC078809.1-201ENST00000427601 140 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 AC073614.1-201ENST00000438690 650 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 MTCO3P18-201ENST00000440206 761 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.43□□□□□ -2.34
PDE6DO43924 MTND3P25-201ENST00000509243 135 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 MTCO3P7-201ENST00000510008 774 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 RNU4-54P-201ENST00000516428 129 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 AC010376.1-201ENST00000522101 334 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.43□□□□□ -2.34
PDE6DO43924 TPRKBP2-201ENST00000565969 475 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 MIR5695-201ENST00000579717 85 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 MIR3118-1-201ENST00000581787 76 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 AL929325.1-201ENST00000603096 117 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 AL592221.1-201ENST00000605266 382 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 AL353765.1-201ENST00000605514 183 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.43□□□□□ -2.34
PDE6DO43924 AL157786.1-207ENST00000627771 695 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 AC106858.1-201ENST00000637497 429 ntBASIC0.43□□□□□ -2.34
PDE6DO43924 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
PDE6DO43924 BX322639.1-202ENST00000423987 2213 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 RNU4-12P-201ENST00000365233 139 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 RNU6-418P-201ENST00000384035 107 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 RNU6-378P-201ENST00000384324 107 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 SNORA26.3-201ENST00000391119 136 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 RPL21P1-201ENST00000399532 476 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.42□□□□□ -2.34
PDE6DO43924 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.42□□□□□ -2.34
PDE6DO43924 CALM2P2-201ENST00000428512 440 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.42□□□□□ -2.34
PDE6DO43924 C1DP4-201ENST00000455429 424 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.42□□□□□ -2.34
PDE6DO43924 RPS23P5-201ENST00000495419 428 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.42□□□□□ -2.34
PDE6DO43924 AC105758.1-201ENST00000506038 399 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 AC022616.6-201ENST00000520479 119 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.42□□□□□ -2.34
PDE6DO43924 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.42□□□□□ -2.34
PDE6DO43924 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.42□□□□□ -2.34
PDE6DO43924 AL513534.2-201ENST00000603836 250 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 AC016727.2-201ENST00000603988 621 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 AC112187.2-201ENST00000604345 283 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 AC064872.1-201ENST00000604823 1072 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 AC009509.4-201ENST00000619202 509 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 AC005858.4-201ENST00000623191 700 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 SNORD3E-202ENST00000627253 216 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 AC023934.1-201ENST00000574529 2389 ntBASIC0.42□□□□□ -2.34
PDE6DO43924 Y_RNA.110-201ENST00000363220 99 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 RNU6-1080P-201ENST00000383982 107 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 SNORA80D-201ENST00000384488 135 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 RNU6-950P-201ENST00000384651 107 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
PDE6DO43924 RNU6-607P-201ENST00000411283 108 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.41□□□□□ -2.34
PDE6DO43924 AL157398.1-201ENST00000452981 186 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 SNRPFP4-201ENST00000456366 242 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 snoU13.26-201ENST00000459452 105 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.41□□□□□ -2.34
PDE6DO43924 RBBP4P6-201ENST00000508098 202 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 RNU6-377P-201ENST00000515965 102 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 RNU2-34P-201ENST00000516534 121 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 RNU6-922P-201ENST00000516753 99 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 AP003484.1-201ENST00000530974 250 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
PDE6DO43924 HSPE1P4-201ENST00000550617 308 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.41□□□□□ -2.34
PDE6DO43924 AC073539.2-201ENST00000597113 165 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 AC078795.3-201ENST00000602913 472 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 AL031281.1-201ENST00000604049 488 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.41□□□□□ -2.34
PDE6DO43924 AC241585.2-209ENST00000638217 143 ntBASIC0.41□□□□□ -2.34
PDE6DO43924 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
PDE6DO43924 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
PDE6DO43924 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.4□□□□□ -2.35
PDE6DO43924 AC092268.1-201ENST00000342691 405 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 U3.4-201ENST00000363352 213 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 SNORA24.1-201ENST00000384401 135 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 RNU6-1031P-201ENST00000384773 107 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.4□□□□□ -2.35
PDE6DO43924 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.4□□□□□ -2.35
PDE6DO43924 USP9YP28-201ENST00000435142 589 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.4□□□□□ -2.35
PDE6DO43924 AC091435.1-201ENST00000505442 584 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.4□□□□□ -2.35
PDE6DO43924 AC119751.5-201ENST00000514077 770 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 RNU6-276P-201ENST00000516114 96 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms