Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNU6-9-201ENST00000384776 107 ntBASIC0.91□□□□□ -2.26
SGCEO43556 RNU6-33P-201ENST00000384793 107 ntBASIC0.91□□□□□ -2.26
SGCEO43556 MIR122-201ENST00000385044 85 ntBASIC0.91□□□□□ -2.26
SGCEO43556 MIR513A1-201ENST00000385138 129 ntBASIC0.91□□□□□ -2.26
SGCEO43556 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SGCEO43556 AL355143.1-201ENST00000407101 841 ntBASIC0.91□□□□□ -2.26
SGCEO43556 RNU2-8P-201ENST00000410727 190 ntBASIC0.91□□□□□ -2.26
SGCEO43556 HIGD1AP15-201ENST00000416198 280 ntBASIC0.91□□□□□ -2.26
SGCEO43556 COX6CP10-201ENST00000416832 224 ntBASIC0.91□□□□□ -2.26
SGCEO43556 AC114982.1-201ENST00000469402 321 ntBASIC0.91□□□□□ -2.26
SGCEO43556 RPS26P45-201ENST00000471748 340 ntBASIC0.91□□□□□ -2.26
SGCEO43556 RPS23P4-201ENST00000487908 423 ntBASIC0.91□□□□□ -2.26
SGCEO43556 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.91□□□□□ -2.26
SGCEO43556 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.91□□□□□ -2.26
SGCEO43556 AC116562.3-201ENST00000506136 177 ntBASIC0.91□□□□□ -2.26
SGCEO43556 SNORD116-28-201ENST00000516123 91 ntBASIC0.91□□□□□ -2.26
SGCEO43556 SNORA31.16-201ENST00000516773 139 ntBASIC0.91□□□□□ -2.26
SGCEO43556 RN7SKP88-201ENST00000516847 250 ntBASIC0.91□□□□□ -2.26
SGCEO43556 AC068587.5-201ENST00000528506 175 ntBASIC0.91□□□□□ -2.26
SGCEO43556 HSPE1P4-201ENST00000550617 308 ntBASIC0.91□□□□□ -2.26
SGCEO43556 EIF4A1P12-201ENST00000551910 141 ntBASIC0.91□□□□□ -2.26
SGCEO43556 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.91□□□□□ -2.26
SGCEO43556 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.91□□□□□ -2.26
SGCEO43556 AP000811.1-201ENST00000603803 651 ntBASIC0.91□□□□□ -2.26
SGCEO43556 AL391646.1-201ENST00000603860 190 ntBASIC0.91□□□□□ -2.26
SGCEO43556 AC105129.3-201ENST00000605455 485 ntBASIC0.91□□□□□ -2.26
SGCEO43556 SNORD114-21-201ENST00000606412 72 ntBASIC0.91□□□□□ -2.26
SGCEO43556 RNU6-6P-201ENST00000606623 107 ntBASIC0.91□□□□□ -2.26
SGCEO43556 AC004492.1-201ENST00000607036 742 ntBASIC0.91□□□□□ -2.26
SGCEO43556 7SK.8-201ENST00000612110 250 ntBASIC0.91□□□□□ -2.26
SGCEO43556 7SK.11-201ENST00000615477 250 ntBASIC0.91□□□□□ -2.26
SGCEO43556 AC104010.1-201ENST00000616889 150 ntBASIC0.91□□□□□ -2.26
SGCEO43556 7SK.13-201ENST00000622040 250 ntBASIC0.91□□□□□ -2.26
SGCEO43556 Y_RNA.22-201ENST00000362492 102 ntBASIC0.9□□□□□ -2.27
SGCEO43556 RNU6-501P-201ENST00000364072 100 ntBASIC0.9□□□□□ -2.27
SGCEO43556 RNU6-692P-201ENST00000384496 107 ntBASIC0.9□□□□□ -2.27
SGCEO43556 Y_RNA.576-201ENST00000384781 102 ntBASIC0.9□□□□□ -2.27
SGCEO43556 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.9□□□□□ -2.27
SGCEO43556 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.9□□□□□ -2.27
SGCEO43556 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.9□□□□□ -2.27
SGCEO43556 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.9□□□□□ -2.27
SGCEO43556 UBL5P1-201ENST00000507979 193 ntBASIC0.9□□□□□ -2.27
SGCEO43556 AC112206.4-201ENST00000515142 405 ntBASIC0.9□□□□□ -2.27
SGCEO43556 RNU6-567P-201ENST00000516746 107 ntBASIC0.9□□□□□ -2.27
SGCEO43556 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
SGCEO43556 AC023050.3-201ENST00000541142 333 ntBASIC0.9□□□□□ -2.27
SGCEO43556 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.9□□□□□ -2.27
SGCEO43556 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.9□□□□□ -2.27
SGCEO43556 NIFKP6-201ENST00000598115 845 ntBASIC0.9□□□□□ -2.27
SGCEO43556 AL359821.1-201ENST00000605519 182 ntBASIC0.9□□□□□ -2.27
SGCEO43556 AC008945.2-201ENST00000606056 604 ntBASIC0.9□□□□□ -2.27
SGCEO43556 BX284668.6-201ENST00000606899 438 ntBASIC0.9□□□□□ -2.27
SGCEO43556 AL365434.2-201ENST00000607979 234 ntBASIC0.9□□□□□ -2.27
SGCEO43556 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.9□□□□□ -2.27
SGCEO43556 AC138649.3-201ENST00000622154 254 ntBASIC0.9□□□□□ -2.27
SGCEO43556 AC091895.1-201ENST00000624494 256 ntBASIC0.9□□□□□ -2.27
SGCEO43556 AL445984.1-201ENST00000637834 659 ntBASIC0.9□□□□□ -2.27
SGCEO43556 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SGCEO43556 AL391994.1-201ENST00000254724 282 ntBASIC0.89□□□□□ -2.27
SGCEO43556 RNU6-116P-201ENST00000384042 109 ntBASIC0.89□□□□□ -2.27
SGCEO43556 SNORA25-201ENST00000384384 134 ntBASIC0.89□□□□□ -2.27
SGCEO43556 RNU6-331P-201ENST00000384724 107 ntBASIC0.89□□□□□ -2.27
SGCEO43556 SNORA26.3-201ENST00000391119 136 ntBASIC0.89□□□□□ -2.27
SGCEO43556 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.89□□□□□ -2.27
SGCEO43556 AC002486.1-201ENST00000435098 391 ntBASIC0.89□□□□□ -2.27
SGCEO43556 GAPDHP17-201ENST00000449858 1001 ntBASIC0.89□□□□□ -2.27
SGCEO43556 AC010531.2-201ENST00000465012 153 ntBASIC0.89□□□□□ -2.27
SGCEO43556 RPS23P5-201ENST00000495419 428 ntBASIC0.89□□□□□ -2.27
SGCEO43556 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.89□□□□□ -2.27
SGCEO43556 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.89□□□□□ -2.27
SGCEO43556 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.89□□□□□ -2.27
SGCEO43556 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.89□□□□□ -2.27
SGCEO43556 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SGCEO43556 ZNF321P-202ENST00000550843 495 ntBASIC0.89□□□□□ -2.27
SGCEO43556 MTND4P33-201ENST00000556706 766 ntBASIC0.89□□□□□ -2.27
SGCEO43556 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.89□□□□□ -2.27
SGCEO43556 MIR3664-201ENST00000579074 99 ntBASIC0.89□□□□□ -2.27
SGCEO43556 AC098848.2-201ENST00000588023 330 ntBASIC0.89□□□□□ -2.27
SGCEO43556 AL451064.1-201ENST00000607718 471 ntBASIC0.89□□□□□ -2.27
SGCEO43556 AC040896.1-201ENST00000613819 479 ntBASIC0.89□□□□□ -2.27
SGCEO43556 AC009878.1-201ENST00000621819 340 ntBASIC0.89□□□□□ -2.27
SGCEO43556 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SGCEO43556 RNU1-76P-201ENST00000362903 159 ntBASIC0.88□□□□□ -2.27
SGCEO43556 RNU6-336P-201ENST00000364891 107 ntBASIC0.88□□□□□ -2.27
SGCEO43556 RNU6-53P-201ENST00000365367 106 ntBASIC0.88□□□□□ -2.27
SGCEO43556 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
SGCEO43556 AL133396.1-201ENST00000432048 687 ntBASIC0.88□□□□□ -2.27
SGCEO43556 AC007547.1-201ENST00000462177 490 ntBASIC0.88□□□□□ -2.27
SGCEO43556 AC016632.1-201ENST00000503994 196 ntBASIC0.88□□□□□ -2.27
SGCEO43556 AC091951.3-201ENST00000504093 246 ntBASIC0.88□□□□□ -2.27
SGCEO43556 AC108729.3-201ENST00000513484 108 ntBASIC0.88□□□□□ -2.27
SGCEO43556 RNU6-1041P-201ENST00000516254 102 ntBASIC0.88□□□□□ -2.27
SGCEO43556 RNA5SP503-201ENST00000517047 117 ntBASIC0.88□□□□□ -2.27
SGCEO43556 CYCSP23-201ENST00000519781 313 ntBASIC0.88□□□□□ -2.27
SGCEO43556 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.88□□□□□ -2.27
SGCEO43556 MIR4709-201ENST00000577272 72 ntBASIC0.88□□□□□ -2.27
SGCEO43556 MIR4498-201ENST00000577599 66 ntBASIC0.88□□□□□ -2.27
SGCEO43556 AC107304.1-201ENST00000604229 296 ntBASIC0.88□□□□□ -2.27
SGCEO43556 AC018714.1-201ENST00000605028 208 ntBASIC0.88□□□□□ -2.27
SGCEO43556 Z99289.3-201ENST00000605586 594 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms