Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 RNU6-438P-201ENST00000365561 103 ntBASIC1.71□□□□□ -2.14
CLDN3O15551 Y_RNA.504-201ENST00000384481 104 ntBASIC1.71□□□□□ -2.14
CLDN3O15551 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CLDN3O15551 RN7SKP61-201ENST00000410642 295 ntBASIC1.71□□□□□ -2.14
CLDN3O15551 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.71□□□□□ -2.14
CLDN3O15551 RPS27AP8-201ENST00000452665 445 ntBASIC1.71□□□□□ -2.14
CLDN3O15551 AC016632.1-201ENST00000503994 196 ntBASIC1.71□□□□□ -2.14
CLDN3O15551 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.71□□□□□ -2.14
CLDN3O15551 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.71□□□□□ -2.14
CLDN3O15551 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.71□□□□□ -2.14
CLDN3O15551 AL137161.1-201ENST00000532231 390 ntBASIC1.71□□□□□ -2.14
CLDN3O15551 AL356157.2-201ENST00000605122 111 ntBASIC1.71□□□□□ -2.14
CLDN3O15551 RNU6-85P-201ENST00000605989 107 ntBASIC1.71□□□□□ -2.14
CLDN3O15551 BX248123.2-201ENST00000606318 124 ntBASIC1.71□□□□□ -2.14
CLDN3O15551 AP000770.2-201ENST00000623694 100 ntBASIC1.71□□□□□ -2.14
CLDN3O15551 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CLDN3O15551 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CLDN3O15551 AC092268.1-201ENST00000342691 405 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 RNU6-457P-201ENST00000363999 107 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 Y_RNA.332-201ENST00000365271 113 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 RNU6-517P-201ENST00000384362 110 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 SNORA17.3-201ENST00000391159 129 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 RNU6-903P-201ENST00000391270 109 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 AL049545.1-201ENST00000401856 572 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 MTCYBP2-201ENST00000407745 171 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 RNA5SP100-201ENST00000410903 110 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 RNA5SP59-201ENST00000410922 110 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 MTCO2P34-201ENST00000421994 607 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 CETN4P-201ENST00000432407 469 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.7□□□□□ -2.14
CLDN3O15551 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.7□□□□□ -2.14
CLDN3O15551 AL031667.1-201ENST00000440222 725 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 AL356010.1-201ENST00000456364 102 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 RNU7-63P-201ENST00000459054 62 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 RNU7-167P-201ENST00000459160 62 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 AC130509.1-201ENST00000464158 433 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 AC008834.1-201ENST00000511612 175 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 SNORA44.1-201ENST00000517031 108 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.7□□□□□ -2.14
CLDN3O15551 MIR5583-1-201ENST00000580941 59 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 MTATP6P3-201ENST00000581686 676 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 MIR3941-201ENST00000582572 103 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 AC078795.3-201ENST00000602913 472 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.7□□□□□ -2.14
CLDN3O15551 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CLDN3O15551 RNA5SP432-201ENST00000362480 116 ntBASIC1.69□□□□□ -2.14
CLDN3O15551 U3.9-201ENST00000363823 204 ntBASIC1.69□□□□□ -2.14
CLDN3O15551 RNU4-42P-201ENST00000364738 142 ntBASIC1.69□□□□□ -2.14
CLDN3O15551 MIR517C-201ENST00000385103 95 ntBASIC1.69□□□□□ -2.14
CLDN3O15551 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.69□□□□□ -2.14
CLDN3O15551 MTCYBP8-201ENST00000422855 651 ntBASIC1.69□□□□□ -2.14
CLDN3O15551 SNRPEP8-201ENST00000442866 260 ntBASIC1.69□□□□□ -2.14
CLDN3O15551 AMD1P1-201ENST00000457220 922 ntBASIC1.69□□□□□ -2.14
CLDN3O15551 BET1P1-201ENST00000482276 359 ntBASIC1.69□□□□□ -2.14
CLDN3O15551 AC010493.1-201ENST00000513479 292 ntBASIC1.69□□□□□ -2.14
CLDN3O15551 MTCO2P4-201ENST00000517968 247 ntBASIC1.69□□□□□ -2.14
CLDN3O15551 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.69□□□□□ -2.14
CLDN3O15551 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.69□□□□□ -2.14
CLDN3O15551 HIF1AP1-201ENST00000553642 175 ntBASIC1.69□□□□□ -2.14
CLDN3O15551 MTCO3P23-201ENST00000561363 289 ntBASIC1.69□□□□□ -2.14
CLDN3O15551 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.69□□□□□ -2.14
CLDN3O15551 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.69□□□□□ -2.14
CLDN3O15551 AC010928.2-201ENST00000588017 287 ntBASIC1.69□□□□□ -2.14
CLDN3O15551 AC005786.1-201ENST00000588553 154 ntBASIC1.69□□□□□ -2.14
CLDN3O15551 RNU6-60P-201ENST00000364792 103 ntBASIC1.68□□□□□ -2.14
CLDN3O15551 Y_RNA.399-201ENST00000383955 105 ntBASIC1.68□□□□□ -2.14
CLDN3O15551 MIR934-201ENST00000401241 83 ntBASIC1.68□□□□□ -2.14
CLDN3O15551 RNA5SP201-201ENST00000410316 124 ntBASIC1.68□□□□□ -2.14
CLDN3O15551 AC123900.1-201ENST00000420390 96 ntBASIC1.68□□□□□ -2.14
CLDN3O15551 AC092447.3-201ENST00000426027 686 ntBASIC1.68□□□□□ -2.14
CLDN3O15551 AL133396.1-201ENST00000432048 687 ntBASIC1.68□□□□□ -2.14
CLDN3O15551 ATP5EP1-201ENST00000510257 156 ntBASIC1.68□□□□□ -2.14
CLDN3O15551 Y_RNA.695-201ENST00000516715 107 ntBASIC1.68□□□□□ -2.14
CLDN3O15551 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN3O15551 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN3O15551 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN3O15551 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN3O15551 MIR4303-201ENST00000581299 66 ntBASIC1.68□□□□□ -2.14
CLDN3O15551 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.68□□□□□ -2.14
CLDN3O15551 RMST_6.1-201ENST00000611980 203 ntBASIC1.68□□□□□ -2.14
CLDN3O15551 AC136475.10-201ENST00000620253 385 ntBASIC1.68□□□□□ -2.14
CLDN3O15551 WWP1P1-201ENST00000466609 2769 ntBASIC1.68□□□□□ -2.14
CLDN3O15551 U8.10-201ENST00000384260 133 ntBASIC1.67□□□□□ -2.14
CLDN3O15551 MIR30A-201ENST00000385092 71 ntBASIC1.67□□□□□ -2.14
CLDN3O15551 RNU6-1106P-201ENST00000390845 107 ntBASIC1.67□□□□□ -2.14
CLDN3O15551 SNORA67.6-201ENST00000391093 99 ntBASIC1.67□□□□□ -2.14
CLDN3O15551 RNU2-41P-201ENST00000410991 178 ntBASIC1.67□□□□□ -2.14
CLDN3O15551 AC139712.2-201ENST00000424302 339 ntBASIC1.67□□□□□ -2.14
CLDN3O15551 AL513185.2-201ENST00000425543 193 ntBASIC1.67□□□□□ -2.14
CLDN3O15551 RPL23AP95-201ENST00000426806 265 ntBASIC1.67□□□□□ -2.14
CLDN3O15551 USP9YP29-201ENST00000445112 563 ntBASIC1.67□□□□□ -2.14
CLDN3O15551 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN3O15551 RPL31P3-201ENST00000458430 332 ntBASIC1.67□□□□□ -2.14
CLDN3O15551 RNU1-131P-201ENST00000458943 161 ntBASIC1.67□□□□□ -2.14
CLDN3O15551 AC091874.1-201ENST00000511402 339 ntBASIC1.67□□□□□ -2.14
CLDN3O15551 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.67□□□□□ -2.14
CLDN3O15551 RNU5F-4P-201ENST00000516581 114 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms