Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
UPK1AO00322 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 AF246928.1-201ENST00000623768 87 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.11□□□□□ -2.23
UPK1AO00322 MTND4P14-201ENST00000435799 1354 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 AC092268.1-201ENST00000342691 405 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 U3.9-201ENST00000363823 204 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 RNU6-434P-201ENST00000384376 107 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 RNU6-1026P-201ENST00000384465 108 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 RNU6-393P-201ENST00000384475 107 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 SNORA40.3-201ENST00000390964 122 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 RNU1-78P-201ENST00000391248 165 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.1□□□□□ -2.23
UPK1AO00322 AL669831.1-202ENST00000428504 417 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK1AO00322 RPL31P35-201ENST00000431058 377 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 GTF2IP13-201ENST00000438487 386 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 RPS27AP8-201ENST00000452665 445 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 AL033528.1-201ENST00000453780 140 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 RPS29P15-201ENST00000458329 171 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 RNU7-125P-201ENST00000458760 62 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.1□□□□□ -2.23
UPK1AO00322 AK3P2-201ENST00000507976 429 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 LRRC34P2-201ENST00000514850 553 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 RNU6-1129P-201ENST00000515964 104 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 RN7SKP265-201ENST00000516448 223 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK1AO00322 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
UPK1AO00322 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK1AO00322 AC109446.2-201ENST00000567872 497 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK1AO00322 MIR4775-201ENST00000581168 75 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 VN1R107P-201ENST00000601784 209 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 AL356157.2-201ENST00000605122 111 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 AP001506.1-201ENST00000615444 211 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 AL157834.3-201ENST00000615543 103 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 uc_338.11-201ENST00000619132 160 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 MIR8063-201ENST00000621930 81 ntBASIC1.1□□□□□ -2.23
UPK1AO00322 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.1□□□□□ -2.23
UPK1AO00322 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.1□□□□□ -2.23
UPK1AO00322 RNU6-108P-201ENST00000365558 107 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 SNORA32.2-201ENST00000384049 122 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 RNU6-74P-201ENST00000384235 107 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 MIR1-2-201ENST00000384961 85 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 AL031577.2-201ENST00000404133 280 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 RN7SKP61-201ENST00000410642 295 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 HMGN1P14-201ENST00000412459 517 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 AL591704.2-201ENST00000421658 181 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK1AO00322 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK1AO00322 RPS6P15-201ENST00000431996 751 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 FTH1P12-201ENST00000432137 551 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.09□□□□□ -2.23
UPK1AO00322 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK1AO00322 RNU7-14P-201ENST00000459331 62 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK1AO00322 AC016632.1-201ENST00000503994 196 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK1AO00322 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.09□□□□□ -2.23
UPK1AO00322 RNU6-232P-201ENST00000517144 64 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.09□□□□□ -2.23
UPK1AO00322 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK1AO00322 ZNF321P-202ENST00000550843 495 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.09□□□□□ -2.23
UPK1AO00322 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK1AO00322 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.09□□□□□ -2.23
UPK1AO00322 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.09□□□□□ -2.23
UPK1AO00322 AC069114.2-201ENST00000604699 304 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 AC006566.1-201ENST00000608943 513 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 AL050303.3-201ENST00000613704 284 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 AC083806.3-201ENST00000614016 455 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 AC022513.1-201ENST00000624512 117 ntBASIC1.09□□□□□ -2.23
UPK1AO00322 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.09□□□□□ -2.24
UPK1AO00322 MTND5P9-201ENST00000503854 1755 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.08□□□□□ -2.24
UPK1AO00322 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
UPK1AO00322 RNU4-91P-201ENST00000364778 135 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 SNORA72.3-201ENST00000365074 132 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 MIR520A-201ENST00000384862 85 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
UPK1AO00322 AC004965.1-201ENST00000413033 213 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 AC002486.1-201ENST00000435098 391 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 AC009961.2-201ENST00000435771 251 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 UBE2V1P8-201ENST00000437166 265 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.08□□□□□ -2.24
UPK1AO00322 MTND1P18-201ENST00000448191 573 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 RPL9P9-202ENST00000466501 579 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 AC079382.1-201ENST00000493346 557 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.08□□□□□ -2.24
UPK1AO00322 ATP5EP1-201ENST00000510257 156 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 SNORD27.1-201ENST00000516319 72 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 RNU6-567P-201ENST00000516746 107 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 SNORD60.2-201ENST00000516883 86 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 AP003072.2-201ENST00000527756 676 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 AP003034.1-201ENST00000534621 422 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 AC009094.1-201ENST00000564443 426 ntBASIC1.08□□□□□ -2.24
UPK1AO00322 RSL24D1P11-201ENST00000591045 491 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms