Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC188H7C350 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC188H7C350 PRELID3BP1-201ENST00000457142 540 ntBASIC2.15□□□□□ -2.07
CCDC188H7C350 AC008413.1-201ENST00000511864 177 ntBASIC2.15□□□□□ -2.07
CCDC188H7C350 Y_RNA.655-201ENST00000515919 96 ntBASIC2.15□□□□□ -2.07
CCDC188H7C350 MIR449C-201ENST00000516047 92 ntBASIC2.15□□□□□ -2.07
CCDC188H7C350 SNORA31.25-201ENST00000517242 134 ntBASIC2.15□□□□□ -2.07
CCDC188H7C350 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC188H7C350 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC188H7C350 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC188H7C350 AC146944.4-201ENST00000602697 718 ntBASIC2.15□□□□□ -2.07
CCDC188H7C350 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC188H7C350 SNORD14D-201ENST00000384390 87 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 SNORD116-4-201ENST00000384733 96 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 Y_RNA.573-201ENST00000384763 105 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 HMGN2P39-201ENST00000398005 273 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 MIR208B-201ENST00000401172 77 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 SUMO2P12-201ENST00000405924 140 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 AL357139.1-201ENST00000407792 426 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 UBE2V1P4-201ENST00000425374 344 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC188H7C350 RPL23AP95-201ENST00000426806 265 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC188H7C350 AL133396.1-201ENST00000432048 687 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC188H7C350 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC188H7C350 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC188H7C350 AMD1P1-201ENST00000457220 922 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 AC025465.4-201ENST00000513422 638 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 RNA5SP364-201ENST00000516938 78 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.14□□□□□ -2.07
CCDC188H7C350 AC026371.1-201ENST00000551867 419 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC188H7C350 AC233702.2-202ENST00000562547 291 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC188H7C350 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC188H7C350 EIF1P4-201ENST00000572664 335 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC188H7C350 BNIP3P25-201ENST00000596023 559 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC188H7C350 AC078795.3-201ENST00000602913 472 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 AC243829.7-201ENST00000633081 225 ntBASIC2.14□□□□□ -2.07
CCDC188H7C350 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC188H7C350 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC188H7C350 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC188H7C350 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC188H7C350 RNU6-451P-201ENST00000362921 107 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 SNORD113-7-201ENST00000363762 77 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 RNU6-522P-201ENST00000364497 107 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 SNORA36A-201ENST00000384221 132 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 RNU6-790P-201ENST00000384479 105 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 MIR29C-201ENST00000385231 88 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 Y_RNA.615-201ENST00000410769 117 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 EIF1AXP1-201ENST00000419267 435 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC188H7C350 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC188H7C350 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC188H7C350 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC188H7C350 PTP4A1P4-201ENST00000512479 322 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 Y_RNA.665-201ENST00000516177 98 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 RNU2-19P-201ENST00000517288 84 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC188H7C350 Z98751.3-201ENST00000604447 521 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 BNIP3P10-201ENST00000605360 577 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 AC139792.2-201ENST00000624218 587 ntBASIC2.13□□□□□ -2.07
CCDC188H7C350 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.13□□□□□ -2.07
CCDC188H7C350 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CCDC188H7C350 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC188H7C350 AC121333.1-201ENST00000567488 2709 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC188H7C350 U3.9-201ENST00000363823 204 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 Y_RNA.516-201ENST00000384541 124 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 MIR504-201ENST00000385065 83 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CCDC188H7C350 AL355497.1-201ENST00000406262 551 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 RNU6-325P-201ENST00000411132 105 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 RNU6-373P-201ENST00000411247 98 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 AC009161.1-201ENST00000417306 376 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC188H7C350 HMGN2P38-201ENST00000423806 265 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC188H7C350 NDUFA5P4-201ENST00000436704 385 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 AC010095.1-201ENST00000443543 144 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC188H7C350 AC055731.1-201ENST00000474387 401 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 AC132942.1-201ENST00000486753 483 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 MTCO1P29-201ENST00000496868 288 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC188H7C350 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC188H7C350 RNA5SP490-201ENST00000517141 136 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 AP005660.1-201ENST00000522972 293 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 CYP4A27P-201ENST00000567218 190 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 MIR4448-201ENST00000584360 86 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 AC025754.2-201ENST00000606491 432 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC188H7C350 U4.5-201ENST00000617137 123 ntBASIC2.12□□□□□ -2.07
CCDC188H7C350 MIR1248-201ENST00000629190 106 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms