Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MTND4LP14-201ENST00000429447 288 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 AL162725.1-201ENST00000435405 301 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU7-59P-201ENST00000459101 61 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 RNA5SP458-201ENST00000516188 119 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 SNORA43.2-201ENST00000516652 128 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 AC109810.1-201ENST00000534066 224 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 MTND1P15-201ENST00000579262 949 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 AL034555.1-201ENST00000604816 211 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 AL513423.1-201ENST00000621695 132 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 AL603839.4-201ENST00000624658 1005 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 SCARNA4-202ENST00000625402 129 ntBASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.27□□□□□ -2.45
CHKB-CPT1BH3BT56 SNORD56.1-201ENST00000362913 68 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 SNORA33-201ENST00000363664 130 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU1-133P-201ENST00000364867 167 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU6-877P-201ENST00000383868 107 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU6-701P-201ENST00000384059 107 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 AC073261.1-201ENST00000429409 121 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 MTCO1P19-201ENST00000443487 500 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU6-953P-201ENST00000459154 107 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 HMGB1P29-201ENST00000505659 499 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU6-863P-201ENST00000515989 104 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 SNORA31.10-201ENST00000516482 106 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU6-64P-201ENST00000517119 105 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 MTND2P7-201ENST00000521337 640 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 AC004223.2-201ENST00000590309 544 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 AL391903.3-201ENST00000612158 163 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 AL079343.1-201ENST00000572358 1771 ntBASIC-0.28□□□□□ -2.45
CHKB-CPT1BH3BT56 MIR337-201ENST00000362281 93 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 SNORA63.3-201ENST00000362682 132 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-37P-201ENST00000362692 107 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-11P-201ENST00000364234 107 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-1-201ENST00000383898 107 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-42P-201ENST00000384165 107 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-36P-201ENST00000384172 107 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-4P-201ENST00000384205 107 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-5P-201ENST00000384238 107 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-3P-201ENST00000384314 107 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-2-201ENST00000384627 107 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-9-201ENST00000384776 107 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-33P-201ENST00000384793 107 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 MIR520F-201ENST00000384824 87 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 MIR19A-201ENST00000384878 82 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNA5SP109-201ENST00000391010 116 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNA5SP193-201ENST00000410353 107 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 AL627311.1-201ENST00000431514 115 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 TAF9P1-201ENST00000445421 515 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 TAF9P2-201ENST00000454958 515 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 AC006026.2-201ENST00000457376 180 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-583P-201ENST00000516012 92 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-914P-201ENST00000516749 109 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 MIR3678-201ENST00000578455 94 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 AC023932.2-201ENST00000603176 175 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 BNIP3P19-201ENST00000605397 577 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-6P-201ENST00000606623 107 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 AC090517.2-201ENST00000614966 680 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 AL078595.3-201ENST00000623815 1166 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 AC008133.2-201ENST00000624540 351 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 MTND5P42-201ENST00000637720 498 ntBASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.29□□□□□ -2.46
CHKB-CPT1BH3BT56 AL390237.1-201ENST00000404226 1415 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-744P-201ENST00000365557 107 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 SNORD105-201ENST00000386910 85 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 RNA5SP323-201ENST00000391094 133 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 RPS3AP36-201ENST00000398190 775 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 AL603865.2-201ENST00000401679 213 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 AL451046.2-201ENST00000403074 277 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 AC010154.1-201ENST00000425857 269 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 ISCA1P6-201ENST00000427740 390 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 AC007969.2-201ENST00000441891 191 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 AL133217.1-201ENST00000450980 425 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 AC115990.1-201ENST00000526957 301 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 AP002001.1-203ENST00000534002 267 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 AC021231.3-201ENST00000558497 370 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 AL157770.1-201ENST00000623049 439 ntBASIC-0.3□□□□□ -2.46
CHKB-CPT1BH3BT56 CDR1-202ENST00000625883 1485 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms