Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC092268.1-201ENST00000342691 405 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 Y_RNA.100-201ENST00000363141 102 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 RNU6-743P-201ENST00000364151 106 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 RNU6-128P-201ENST00000383976 107 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 SNORA36A-201ENST00000384221 132 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 RNA5SP270-201ENST00000411361 118 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 AL030996.1-201ENST00000411430 235 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 EDDM3CP-201ENST00000415977 425 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 RPS15AP28-201ENST00000435088 386 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 MTCO3P18-201ENST00000440206 761 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 RNU7-66P-201ENST00000459469 62 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 RPS29P27-201ENST00000463711 170 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 AC104564.1-201ENST00000493028 407 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 AC096745.1-201ENST00000509945 370 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 RNU6-256P-201ENST00000516747 97 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 RNU6-273P-201ENST00000516937 96 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 AC034114.1-201ENST00000520293 285 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 AC121758.2-201ENST00000553271 193 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 AL078605.1-201ENST00000603529 500 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 MTND5P6-201ENST00000422338 1798 ntBASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
NPIPA3F8WFD2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 Y_RNA.414-201ENST00000384011 101 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 SNORA32.2-201ENST00000384049 122 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 RNU6-933P-201ENST00000384424 107 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 MIR521-1-201ENST00000384902 87 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AC009161.1-201ENST00000417306 376 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 ZNF885P-201ENST00000420174 1098 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AL513185.2-201ENST00000425543 193 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 IFNA20P-201ENST00000436840 528 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AC096638.1-201ENST00000444678 216 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 RNU7-187P-201ENST00000458985 68 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 snoU13.15-201ENST00000459407 104 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 RPS29P25-201ENST00000481709 171 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 MTCO1P29-201ENST00000496868 288 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 TRBVA-201ENST00000498804 316 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 MIR449C-201ENST00000516047 92 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 RNU7-193P-201ENST00000516723 65 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 RNU6-1314P-201ENST00000517139 104 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 HSPE1P18-201ENST00000517602 280 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AC022616.8-201ENST00000533569 253 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AC233702.2-202ENST00000562547 291 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 MIR3923-201ENST00000579521 83 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 MIR3672-201ENST00000584290 82 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AC002553.4-201ENST00000616896 331 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 AC012640.5-201ENST00000623897 319 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 SNORA43.4-201ENST00000629559 138 ntBASIC2.06□□□□□ -2.08
NPIPA3F8WFD2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 RNA5SP118-201ENST00000410385 109 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 Y_RNA.599-201ENST00000410489 109 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 RNU2-48P-201ENST00000410694 191 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 AL590632.1-201ENST00000424289 371 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 USP9YP28-201ENST00000435142 589 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 NFU1P2-201ENST00000448700 469 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 UBL5P3-201ENST00000475112 231 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 AC107953.1-201ENST00000522216 297 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 IGKV3-31-201ENST00000523109 329 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 AC026464.5-201ENST00000562497 722 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 MIR5007-201ENST00000583098 95 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 AL031274.2-201ENST00000599419 203 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 AC146944.4-201ENST00000602697 718 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 AL138726.1-201ENST00000614873 333 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 MIR7843-201ENST00000622274 79 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 AC009033.1-201ENST00000624279 431 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 AL450472.1-202ENST00000637286 180 ntBASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NPIPA3F8WFD2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 MIRLET7G-201ENST00000362280 84 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 Y_RNA.123-201ENST00000363338 102 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 Y_RNA.151-201ENST00000363566 112 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 Y_RNA.157-201ENST00000363638 102 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 SNORA6-201ENST00000384033 151 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 Y_RNA.505-201ENST00000384489 102 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 MIR504-201ENST00000385065 83 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 MIR221-201ENST00000385135 110 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 SNORA46.1-201ENST00000391069 153 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms