Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC106754.2-201ENST00000623006 233 ntBASIC-0.31□□□□□ -2.46
CPSF4LA6NMK7 AC008133.2-201ENST00000624540 351 ntBASIC-0.31□□□□□ -2.46
CPSF4LA6NMK7 RNU6-28P-201ENST00000362378 107 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 SNORD114-26-201ENST00000363543 72 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 RNU6-343P-201ENST00000364709 104 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 RNU6-793P-201ENST00000384233 104 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 MIR7-1-201ENST00000384871 110 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 SNORD105-201ENST00000386910 85 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 MTCO2P31-201ENST00000402702 684 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 FCF1P10-201ENST00000407590 479 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 RPL21P24-201ENST00000413752 448 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 VPS26BP1-201ENST00000417155 755 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 AL162725.1-201ENST00000435405 301 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 RPS25P9-201ENST00000435591 252 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 RPL39P6-201ENST00000448289 150 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 RPL7P55-201ENST00000450522 746 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 MTND1P9-201ENST00000453775 944 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 RPL37P6-201ENST00000460682 294 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 HMGB1P28-201ENST00000507778 552 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 AL390123.1-201ENST00000603216 237 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 AL391903.3-201ENST00000612158 163 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 AC008147.4-201ENST00000617570 1204 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 AL078595.3-201ENST00000623815 1166 ntBASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.32□□□□□ -2.46
CPSF4LA6NMK7 RNU6-223P-201ENST00000362830 107 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 RNU6-40P-201ENST00000384254 107 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 SNORA12.1-201ENST00000390873 148 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 SNORA12-201ENST00000391162 147 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 AL603865.2-201ENST00000401679 213 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 MTND1P21-201ENST00000412991 285 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 MTCO3P41-201ENST00000414801 328 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 RAC1P6-201ENST00000423911 575 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 AC002486.1-201ENST00000435098 391 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 MTCO2P18-201ENST00000457151 658 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 snoU13.8-201ENST00000458890 104 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 AC010531.2-201ENST00000465012 153 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 AC104136.1-201ENST00000512969 394 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 AC023157.2-201ENST00000540596 141 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 AC023827.1-201ENST00000569247 97 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 MIR4305-201ENST00000583252 102 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 AC004223.2-201ENST00000590309 544 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.33□□□□□ -2.46
CPSF4LA6NMK7 SNORA33-201ENST00000363664 130 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 RNA5SP128-201ENST00000365305 116 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 RNU6-716P-201ENST00000365621 103 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 SNORA32.2-201ENST00000384049 122 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 RNU6-114P-201ENST00000384704 105 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 MIR217-201ENST00000384817 110 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 MTCO2P34-201ENST00000421994 607 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 MTCO2P5-201ENST00000422621 426 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 AC013262.1-201ENST00000426710 252 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 AL606489.2-201ENST00000433886 234 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 SEPT7P5-201ENST00000434048 306 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 SEPT7P4-201ENST00000437076 306 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 MTCO1P19-201ENST00000443487 500 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 RNU1-86P-201ENST00000516108 154 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 RNU1-107P-201ENST00000516617 154 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 AC112693.2-201ENST00000556538 232 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 MIR4637-201ENST00000582405 84 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 MTND4P21-201ENST00000453886 1357 ntBASIC-0.34□□□□□ -2.46
CPSF4LA6NMK7 MIR18A-201ENST00000362310 71 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 RNU6-819P-201ENST00000364116 107 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 RNA5SP517-201ENST00000364724 117 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 MIR573-201ENST00000384964 99 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 RNA5SP390-201ENST00000410191 113 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 SNORA40.8-201ENST00000411034 126 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 MRPS36P1-201ENST00000421291 307 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms