Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 AC073413.2-201ENST00000604332 360 ntBASIC1.42□□□□□ -2.18
SMCO2A6NFE2 Z99289.3-201ENST00000605586 594 ntBASIC1.42□□□□□ -2.18
SMCO2A6NFE2 AC006566.1-201ENST00000608943 513 ntBASIC1.42□□□□□ -2.18
SMCO2A6NFE2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
SMCO2A6NFE2 AC120349.3-201ENST00000624377 529 ntBASIC1.42□□□□□ -2.18
SMCO2A6NFE2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.42□□□□□ -2.18
SMCO2A6NFE2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.41□□□□□ -2.18
SMCO2A6NFE2 RNU4-48P-201ENST00000365559 182 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.41□□□□□ -2.18
SMCO2A6NFE2 RNU6-1029P-201ENST00000384109 107 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 Y_RNA.480-201ENST00000384364 102 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 MIR1-2-201ENST00000384961 85 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 RNU6-1245P-201ENST00000411130 106 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 MTCO2P34-201ENST00000421994 607 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 AL365203.2-201ENST00000423444 196 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 SDAD1P3-201ENST00000427380 333 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 ISCA1P6-201ENST00000427740 390 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.41□□□□□ -2.18
SMCO2A6NFE2 AL133396.1-201ENST00000432048 687 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.41□□□□□ -2.18
SMCO2A6NFE2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.41□□□□□ -2.18
SMCO2A6NFE2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.41□□□□□ -2.18
SMCO2A6NFE2 RNU2-69P-201ENST00000516061 100 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 RNU6-759P-201ENST00000516740 103 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SMCO2A6NFE2 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.41□□□□□ -2.18
SMCO2A6NFE2 MTND1P24-201ENST00000552175 861 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 AC016727.1-205ENST00000605437 569 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 AL359821.1-201ENST00000605519 182 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 MIR8074-201ENST00000615081 81 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 AC008250.2-201ENST00000615261 205 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 AL450472.1-202ENST00000637286 180 ntBASIC1.41□□□□□ -2.18
SMCO2A6NFE2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SMCO2A6NFE2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
SMCO2A6NFE2 AC245060.5-201ENST00000610778 3293 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
SMCO2A6NFE2 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SMCO2A6NFE2 RNU6-428P-201ENST00000362942 107 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 RNU6-112P-201ENST00000363599 104 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 RNU4-91P-201ENST00000364778 135 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 RNU6-1127P-201ENST00000384580 107 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 RNU6-296P-201ENST00000384608 107 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 SNORA40.3-201ENST00000390964 122 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 SNORA16.2-201ENST00000390991 127 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.4□□□□□ -2.19
SMCO2A6NFE2 RPL31P35-201ENST00000431058 377 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.4□□□□□ -2.19
SMCO2A6NFE2 AC244670.1-201ENST00000436879 112 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 AC087477.1-201ENST00000465747 340 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 RPL36AP21-201ENST00000490372 323 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 AC079382.1-201ENST00000493346 557 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.4□□□□□ -2.19
SMCO2A6NFE2 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.4□□□□□ -2.19
SMCO2A6NFE2 AC005741.1-201ENST00000511094 432 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 MTCO3P28-201ENST00000513351 515 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.4□□□□□ -2.19
SMCO2A6NFE2 RN7SKP287-201ENST00000516546 266 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 SNORA31.16-201ENST00000516773 139 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 RNA5SP503-201ENST00000517047 117 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 MIR4703-201ENST00000577728 79 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 AL590229.1-201ENST00000603497 542 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 AC064872.1-201ENST00000604823 1072 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.4□□□□□ -2.19
SMCO2A6NFE2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SMCO2A6NFE2 RNU6-393P-201ENST00000384475 107 ntBASIC1.39□□□□□ -2.19
SMCO2A6NFE2 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.39□□□□□ -2.19
SMCO2A6NFE2 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
SMCO2A6NFE2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.39□□□□□ -2.19
SMCO2A6NFE2 RPS29P23-201ENST00000458635 123 ntBASIC1.39□□□□□ -2.19
SMCO2A6NFE2 SNRPGP7-201ENST00000469016 106 ntBASIC1.39□□□□□ -2.19
SMCO2A6NFE2 ATP5EP1-201ENST00000510257 156 ntBASIC1.39□□□□□ -2.19
SMCO2A6NFE2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.39□□□□□ -2.19
SMCO2A6NFE2 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.39□□□□□ -2.19
SMCO2A6NFE2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.39□□□□□ -2.19
SMCO2A6NFE2 SNORA77B-201ENST00000578179 125 ntBASIC1.39□□□□□ -2.19
SMCO2A6NFE2 MIR3915-201ENST00000578518 97 ntBASIC1.39□□□□□ -2.19
SMCO2A6NFE2 AC110760.3-201ENST00000598794 467 ntBASIC1.39□□□□□ -2.19
SMCO2A6NFE2 AC012507.3-201ENST00000603556 477 ntBASIC1.39□□□□□ -2.19
SMCO2A6NFE2 AC245014.2-201ENST00000603689 287 ntBASIC1.39□□□□□ -2.19
SMCO2A6NFE2 AC093424.1-201ENST00000604999 338 ntBASIC1.39□□□□□ -2.19
SMCO2A6NFE2 AC246785.4-201ENST00000605374 287 ntBASIC1.39□□□□□ -2.19
SMCO2A6NFE2 PRR13P7-201ENST00000605538 430 ntBASIC1.39□□□□□ -2.19
SMCO2A6NFE2 AL391262.2-201ENST00000622466 494 ntBASIC1.39□□□□□ -2.19
SMCO2A6NFE2 AF246928.1-201ENST00000623768 87 ntBASIC1.39□□□□□ -2.19
SMCO2A6NFE2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.39□□□□□ -2.19
SMCO2A6NFE2 Y_RNA.399-201ENST00000383955 105 ntBASIC1.38□□□□□ -2.19
SMCO2A6NFE2 RNU6-434P-201ENST00000384376 107 ntBASIC1.38□□□□□ -2.19
SMCO2A6NFE2 RNU6-606P-201ENST00000384721 111 ntBASIC1.38□□□□□ -2.19
SMCO2A6NFE2 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
SMCO2A6NFE2 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.38□□□□□ -2.19
SMCO2A6NFE2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.38□□□□□ -2.19
SMCO2A6NFE2 C8orf59P1-201ENST00000429930 303 ntBASIC1.38□□□□□ -2.19
SMCO2A6NFE2 AL121601.2-201ENST00000438019 707 ntBASIC1.38□□□□□ -2.19
SMCO2A6NFE2 AC092473.1-201ENST00000441098 221 ntBASIC1.38□□□□□ -2.19
SMCO2A6NFE2 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.38□□□□□ -2.19
SMCO2A6NFE2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SMCO2A6NFE2 RNA5SP269-201ENST00000459032 137 ntBASIC1.38□□□□□ -2.19
SMCO2A6NFE2 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.38□□□□□ -2.19
SMCO2A6NFE2 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms