Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC112487.2-201ENST00000637950 304 ntBASIC2.18□□□□□ -2.06
TRIM49BA6NDI0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
TRIM49BA6NDI0 SNORD114-19-201ENST00000363072 75 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 Y_RNA.212-201ENST00000364177 102 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 RNU6-306P-201ENST00000384617 107 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 DPH3P2-201ENST00000422618 250 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 AL627311.1-201ENST00000431514 115 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 IFNA20P-201ENST00000436840 528 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 AC098614.3-201ENST00000438957 440 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 AL031274.1-201ENST00000450334 232 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 RNU6-329P-201ENST00000459618 107 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 AC092436.3-201ENST00000511788 257 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 COPS8P3-201ENST00000526024 482 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 AP005639.2-201ENST00000527592 928 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 AC103996.1-201ENST00000555468 102 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 AC011712.1-201ENST00000588959 234 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 AC104260.1-201ENST00000616660 539 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 MTND4P1-201ENST00000457501 1466 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM49BA6NDI0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 RNU6-845P-201ENST00000362578 103 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 Y_RNA.301-201ENST00000364990 103 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 RNU6-827P-201ENST00000365553 106 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 RNU6-767P-201ENST00000384132 107 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 MIR561-201ENST00000385216 97 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 MIR450B-201ENST00000401182 78 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 RNA5SP118-201ENST00000410385 109 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 RNU2-20P-201ENST00000410425 191 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 RNU6-373P-201ENST00000411247 98 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 SNORD56-201ENST00000413522 71 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 VN1R36P-201ENST00000414936 291 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 AC138623.1-201ENST00000418060 216 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 AL445646.1-201ENST00000431784 216 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 PPP1R2P5-201ENST00000457256 603 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 RNU7-187P-201ENST00000458985 68 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 LRRC34P2-201ENST00000514850 553 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 RNU6-864P-201ENST00000516256 108 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 Y_RNA.682-201ENST00000516457 100 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 RNU6-256P-201ENST00000516747 97 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 Y_RNA.702-201ENST00000516843 96 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 AC091135.1-201ENST00000585943 307 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 AC007229.1-201ENST00000590455 412 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 MIR6840-201ENST00000611937 71 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 AC022306.2-201ENST00000617563 647 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 Z69720.2-201ENST00000624755 279 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 MIR3529-201ENST00000637713 78 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 AC121333.1-201ENST00000567488 2709 ntBASIC2.16□□□□□ -2.06
TRIM49BA6NDI0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 RNU6-78P-201ENST00000362897 107 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 RNU6-1059P-201ENST00000363752 98 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 RNU6-82P-201ENST00000363970 107 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 Y_RNA.529-201ENST00000384586 119 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 EIF4E2P1-201ENST00000393781 255 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 MIR548F5-201ENST00000408421 86 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 EDDM3CP-201ENST00000415977 425 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 MTCO3P46-201ENST00000425787 232 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 MTND5P20-201ENST00000448677 143 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 MTND1P11-201ENST00000456661 876 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 AMD1P1-201ENST00000457220 922 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 AC091885.1-201ENST00000506658 268 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 MIR4529-201ENST00000578110 78 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 AL138726.1-201ENST00000614873 333 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 U6.42-201ENST00000618440 107 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 MIR219B-201ENST00000637023 88 ntBASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
TRIM49BA6NDI0 Y_RNA.58-201ENST00000362807 102 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 Y_RNA.154-201ENST00000363624 102 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 RNY3P1-201ENST00000365085 102 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 RNY3-201ENST00000365484 102 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms