Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RNU6-16P-201ENST00000384385 107 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6-1031P-201ENST00000384773 107 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 MIR216A-201ENST00000385063 110 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 RNA5SP109-201ENST00000391010 116 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 MTCYBP39-201ENST00000437562 491 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 MTCYBP42-201ENST00000444653 1130 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 AC006026.2-201ENST00000457376 180 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 RNU7-14P-201ENST00000459331 62 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 AC022447.4-201ENST00000504053 364 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 AP000889.1-201ENST00000530968 660 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 AL390123.1-201ENST00000603216 237 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 AC174048.1-201ENST00000603389 144 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 AC136475.10-201ENST00000620253 385 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 MIR6513-201ENST00000621188 64 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 AC104985.3-201ENST00000623479 597 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 MTND4P5-201ENST00000435821 1374 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 RNY1P8-201ENST00000383970 114 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 MIR653-201ENST00000385279 96 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 SNORA12.1-201ENST00000390873 148 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 SNORD89-201ENST00000390981 114 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 MIR548J-201ENST00000408833 112 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 AC010154.1-201ENST00000425857 269 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 UBE2D3P3-201ENST00000426992 425 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 MTND2P30-201ENST00000456663 382 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 Y_RNA.689-201ENST00000516589 107 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 AC115990.1-201ENST00000526957 301 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 MIR5000-201ENST00000577717 103 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 AC004987.4-201ENST00000603383 338 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 AL356157.2-201ENST00000605122 111 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 AC006270.3-201ENST00000605967 1036 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 AC106754.2-201ENST00000623006 233 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 AL359740.1-201ENST00000624340 592 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 SNORD98-201ENST00000636377 67 ntBASIC0.05□□□□□ -2.4
TCRBV3S1A0A5B6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6-78P-201ENST00000362897 107 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6-877P-201ENST00000383868 107 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 SNORD116-13-201ENST00000384408 92 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 MIR1276-201ENST00000408707 83 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 RNA5SP201-201ENST00000410316 124 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 RNA5SP193-201ENST00000410353 107 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 HIGD1AP15-201ENST00000416198 280 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 AC244098.3-201ENST00000424803 96 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 AL606517.2-201ENST00000442855 241 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 MTND5P2-201ENST00000442927 1142 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 PAXBP1P1-201ENST00000449315 447 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 U7.7-201ENST00000459276 60 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 AC007547.1-201ENST00000462177 490 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 AC113347.3-201ENST00000509113 148 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 AC105313.1-201ENST00000509121 353 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6-947P-201ENST00000516264 106 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 OR8K2P-201ENST00000524645 927 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 ZNF321P-202ENST00000550843 495 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 AC064872.1-201ENST00000604823 1072 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 MIR6788-201ENST00000618842 66 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 AC100810.6-201ENST00000638068 285 ntBASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
TCRBV3S1A0A5B6 snoZ40.1-201ENST00000364540 72 ntBASIC0.03□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6-946P-201ENST00000383878 107 ntBASIC0.03□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6-468P-201ENST00000384003 109 ntBASIC0.03□□□□□ -2.4
TCRBV3S1A0A5B6 SNORA16.2-201ENST00000390991 127 ntBASIC0.03□□□□□ -2.4
TCRBV3S1A0A5B6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.03□□□□□ -2.4
TCRBV3S1A0A5B6 AL355796.1-201ENST00000406706 323 ntBASIC0.03□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.03□□□□□ -2.4
TCRBV3S1A0A5B6 AL031779.1-201ENST00000415663 330 ntBASIC0.03□□□□□ -2.4
TCRBV3S1A0A5B6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
TCRBV3S1A0A5B6 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.03□□□□□ -2.4
TCRBV3S1A0A5B6 MIR4431-201ENST00000579990 94 ntBASIC0.03□□□□□ -2.4
TCRBV3S1A0A5B6 AC025627.3-201ENST00000582078 182 ntBASIC0.03□□□□□ -2.4
TCRBV3S1A0A5B6 Z98751.3-201ENST00000604447 521 ntBASIC0.03□□□□□ -2.4
TCRBV3S1A0A5B6 AL603839.4-201ENST00000624658 1005 ntBASIC0.03□□□□□ -2.4
TCRBV3S1A0A5B6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 RNU1-76P-201ENST00000362903 159 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 RNU6-236P-201ENST00000363886 106 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 SNORA72.2-201ENST00000365028 127 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms