Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL121594.1-201ENST00000475906 575 ntBASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 RN7SKP132-201ENST00000516001 208 ntBASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 RNU5F-2P-201ENST00000516066 82 ntBASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 RNA5SP282-201ENST00000516355 108 ntBASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 AC093732.2-201ENST00000607950 274 ntBASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 AL359198.2-201ENST00000611836 194 ntBASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TCRBV7S3A2A0A539 OR56A5-201ENST00000340110 738 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.28-201ENST00000362554 111 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.31-201ENST00000362574 102 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-212P-201ENST00000362642 104 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-486P-201ENST00000363116 107 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 SNORA63-201ENST00000363450 132 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-1210P-201ENST00000363775 107 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-99P-201ENST00000364721 107 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 RNU1-115P-201ENST00000365329 160 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.428-201ENST00000384078 102 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.496-201ENST00000384444 101 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-700P-201ENST00000391043 107 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 SNORA11-201ENST00000408789 128 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 EIF4EP4-201ENST00000424916 578 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 AC008267.5-201ENST00000424928 265 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 RPL23AP58-201ENST00000440453 469 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 AL353705.4-201ENST00000449661 238 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 SNRPGP7-201ENST00000469016 106 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 AL163540.1-201ENST00000485382 386 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 AF186996.7-201ENST00000492781 209 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 HMGB1P35-201ENST00000503360 598 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 ANP32BP3-201ENST00000559213 706 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 AC010928.2-201ENST00000588017 287 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 7SK.7-201ENST00000603504 247 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 AL078605.1-201ENST00000603529 500 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.812-201ENST00000610788 101 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.784-201ENST00000613803 101 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.787-201ENST00000616522 101 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.780-201ENST00000617336 101 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.801-201ENST00000619005 101 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 MIR7515-201ENST00000637837 67 ntBASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TCRBV7S3A2A0A539 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 MTND4P27-201ENST00000450813 1354 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 SNORA12.2-201ENST00000391040 156 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 CBX3P9-201ENST00000402326 552 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-1156P-201ENST00000410365 100 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 RNA5SP494-201ENST00000410653 129 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 RPS26P42-201ENST00000413485 326 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 AL590135.1-201ENST00000422215 156 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 AC019205.3-201ENST00000424573 156 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 AC016700.2-201ENST00000446011 156 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 AP000705.1-201ENST00000454567 350 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 snoU13.30-201ENST00000458951 104 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 AC015911.1-201ENST00000495111 156 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 RNU7-175P-201ENST00000515915 61 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-567P-201ENST00000516746 107 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 SNORD116.3-201ENST00000517176 78 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 AP003072.1-201ENST00000531740 145 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 AC103810.1-201ENST00000579873 453 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 RMST_6.1-201ENST00000611980 203 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 AC137590.2-201ENST00000619709 240 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 MIR7157-201ENST00000635801 60 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 SNORD98-201ENST00000636377 67 ntBASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TCRBV7S3A2A0A539 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-655P-201ENST00000362858 107 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.132-201ENST00000363421 102 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.202-201ENST00000364083 110 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 SNORA36A-201ENST00000384221 132 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 MIR128-1-201ENST00000384921 82 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 AC012306.1-201ENST00000423267 114 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 MRPS18CP6-201ENST00000423587 223 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 TRIAP1P1-201ENST00000427062 225 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 Z82188.1-201ENST00000436709 154 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 AC009296.1-201ENST00000443146 155 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 AC087477.1-201ENST00000465747 340 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 AC096576.1-201ENST00000489014 359 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 RNU2-53P-201ENST00000516257 147 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 SNORA31.16-201ENST00000516773 139 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 AC023442.1-201ENST00000531247 422 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms