Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU6-189P-201ENST00000516120 101 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 RNA5SP458-201ENST00000516188 119 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 MIR514B-201ENST00000516774 80 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 SNORA31.25-201ENST00000517242 134 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 AC109479.2-201ENST00000517842 174 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 GNAI2P1-201ENST00000541815 315 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 AC245505.1-201ENST00000556398 224 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 MIR4529-201ENST00000578110 78 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 BNIP3P16-201ENST00000589779 534 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 ELOCP5-201ENST00000604924 333 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 AC008121.3-201ENST00000618726 433 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 AC103705.1-201ENST00000619013 241 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 AC073534.2-201ENST00000620377 381 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 AC007792.1-201ENST00000623023 402 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 AC099654.12-201ENST00000639868 649 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-1090P-201ENST00000364065 94 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-483P-201ENST00000384088 108 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-1222P-201ENST00000384615 107 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 SNORD116-4-201ENST00000384733 96 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 U3.40-201ENST00000408706 208 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-908P-201ENST00000410160 94 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 MTCO3P41-201ENST00000414801 328 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 EDDM3CP-201ENST00000415977 425 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 MTND3P16-201ENST00000452205 344 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 RNU7-138P-201ENST00000459479 64 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 SNRPGP7-201ENST00000469016 106 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 AC055731.1-201ENST00000474387 401 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 AK3P2-201ENST00000507976 429 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-1069P-201ENST00000516612 133 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 SNORA31.16-201ENST00000516773 139 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 RNU2-19P-201ENST00000517288 84 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 AC069113.1-201ENST00000517763 267 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 AC034114.1-201ENST00000520293 285 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 CYCSP27-201ENST00000527643 293 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 HMGB1P33-201ENST00000563485 527 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 BNIP3P25-201ENST00000596023 559 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 AC068944.2-201ENST00000610373 403 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 AL121757.2-201ENST00000611223 313 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 AC015540.1-201ENST00000615828 501 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 SDR42E1P4-201ENST00000620894 481 ntBASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SMIM28A0A1B0GU29 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 MTND4P23-201ENST00000447723 1363 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 RNU4-52P-201ENST00000384209 138 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 SNORA67.5-201ENST00000391036 107 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 TIMM9P3-201ENST00000428659 274 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 RNA5SP233-201ENST00000459153 113 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-1208P-201ENST00000459588 107 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 Y_RNA.654-201ENST00000497848 106 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-506P-201ENST00000516553 94 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-667P-201ENST00000517186 102 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 RN7SKP256-201ENST00000517201 314 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 AP000763.2-201ENST00000540641 163 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 MIR5692C1-201ENST00000585309 91 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 FAM157A-202ENST00000615155 405 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 AC068137.3-201ENST00000639191 341 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 AC006026.1-201ENST00000444025 1803 ntBASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.77□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-451P-201ENST00000362921 107 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-82P-201ENST00000363970 107 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 Y_RNA.231-201ENST00000364358 102 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 Y_RNA.481-201ENST00000384373 102 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 SNORA12-201ENST00000391162 147 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 RNU2-32P-201ENST00000411193 191 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 AL356379.1-201ENST00000414105 126 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 SRIP2-201ENST00000428470 166 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 Y_RNA.665-201ENST00000516177 98 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-1281P-201ENST00000516223 105 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-965P-201ENST00000516721 96 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 AC107953.1-201ENST00000522216 297 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 AC016957.1-201ENST00000534895 309 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 AC025423.5-201ENST00000550230 219 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 MIR4303-201ENST00000581299 66 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 AL034555.1-201ENST00000604816 211 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 AL670379.2-201ENST00000604983 252 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 AC064836.2-201ENST00000609491 462 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 AC063943.3-201ENST00000615562 356 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 AL132822.1-201ENST00000617063 513 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 SNORA43.4-201ENST00000629559 138 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 SNORD98-201ENST00000636377 67 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms