Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 MIR548S-201ENST00000581352 82 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC019193.3-201ENST00000609144 554 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 U4atac.1-201ENST00000618345 95 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC008121.3-201ENST00000618726 433 ntBASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.09□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
TRBV4-1A0A0J9YWV2 SNORD50.1-201ENST00000362987 71 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 Y_RNA.123-201ENST00000363338 102 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU6-790P-201ENST00000384479 105 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 Y_RNA.504-201ENST00000384481 104 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MIR491-201ENST00000384877 84 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MIR548F5-201ENST00000408421 86 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC074085.1-201ENST00000413598 418 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 GPM6BP3-201ENST00000442797 145 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC011753.1-201ENST00000451001 220 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 SNORD5.1-201ENST00000458800 75 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC116337.1-201ENST00000509680 687 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC007375.1-201ENST00000554513 578 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AL121579.1-201ENST00000555129 305 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MYL12BP1-201ENST00000569826 507 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 FGF7P1-201ENST00000582820 288 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MIR5007-201ENST00000583098 95 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 UBE2V2P2-201ENST00000587677 504 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AL670379.2-201ENST00000604983 252 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC135507.2-201ENST00000612443 309 ntBASIC2.08□□□□□ -2.08
TRBV4-1A0A0J9YWV2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU5B-2P-201ENST00000363036 113 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU6-596P-201ENST00000365395 98 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU6-1286P-201ENST00000383871 107 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 SNORA36A-201ENST00000384221 132 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU6-306P-201ENST00000384617 107 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AL591034.2-201ENST00000402839 359 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AL356432.1-201ENST00000405809 419 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MTCYBP2-201ENST00000407745 171 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNA5SP201-201ENST00000410316 124 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNA5SP184-201ENST00000411071 108 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 COTL1P1-201ENST00000422309 375 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 WARS2P1-201ENST00000429678 537 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 FTH1P25-201ENST00000447665 469 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC079354.2-201ENST00000453523 154 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNA5SP356-201ENST00000515972 94 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU1-54P-201ENST00000517181 120 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC018630.3-201ENST00000542637 96 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC005668.1-201ENST00000571142 476 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC005730.3-201ENST00000583067 366 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MIR4658-201ENST00000584344 65 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 POLR3GP2-201ENST00000588366 668 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC006023.1-201ENST00000603944 259 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 Z98751.3-201ENST00000604447 521 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AL355297.2-201ENST00000604792 129 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MIR7106-201ENST00000612419 65 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MIR203B-201ENST00000636080 86 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 TPTEP1-208ENST00000636884 213 ntBASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.07□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU1-23P-201ENST00000363361 144 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 SNORA80A-201ENST00000363922 136 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNA5SP387-201ENST00000364226 106 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU6-593P-201ENST00000364716 112 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU6-174P-201ENST00000410406 106 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 HMGB3P2-201ENST00000411913 584 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 NCOR1P3-201ENST00000420479 303 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 EIF4EP2-201ENST00000422816 654 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RPS3AP52-201ENST00000435639 297 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MTATP6P23-201ENST00000440153 476 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AL353572.1-201ENST00000442490 417 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC107399.1-201ENST00000451226 265 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AL139109.1-201ENST00000455491 297 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 CKS1BP2-201ENST00000497342 240 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 HMGB3P3-201ENST00000510526 400 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU6-567P-201ENST00000516746 107 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 EIF4BP1-201ENST00000554881 351 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MIR3200-201ENST00000580767 85 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC005520.5-201ENST00000613926 164 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MIR6128-201ENST00000615528 109 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC092794.2-201ENST00000620933 563 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC090517.3-201ENST00000625170 141 ntBASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.06□□□□□ -2.08
TRBV4-1A0A0J9YWV2 SNORA38-201ENST00000363946 132 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU6-944P-201ENST00000364023 107 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms