Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RPL30P11-203ENST00000598995 310 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 AL355297.3-201ENST00000604082 446 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 ZNF204P-201ENST00000416749 2397 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 AC026241.1-201ENST00000517873 2142 ntBASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 Y_RNA.27-201ENST00000362540 103 ntBASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 Y_RNA.551-201ENST00000384661 102 ntBASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 UBE2DNL-203ENST00000474922 222 ntBASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 AC010655.3-201ENST00000478818 450 ntBASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 RPL23AP94-201ENST00000512518 302 ntBASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 RNU6-1114P-201ENST00000516022 107 ntBASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 RNU6-56P-201ENST00000516986 93 ntBASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 AP000942.4-201ENST00000604811 241 ntBASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 AC006504.1-201ENST00000562493 3666 ntBASIC3.47□□□□□ -1.85
CCDC163A0A0D9SF12 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
CCDC163A0A0D9SF12 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.46□□□□□ -1.85
CCDC163A0A0D9SF12 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 RNU1-76P-201ENST00000362903 159 ntBASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 Y_RNA.512-201ENST00000384518 102 ntBASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 EIF4EP4-201ENST00000424916 578 ntBASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 RPS15AP7-201ENST00000439294 405 ntBASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 snoU13.14-201ENST00000459372 104 ntBASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 AC145146.1-201ENST00000496370 254 ntBASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 AC010469.2-201ENST00000496412 480 ntBASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 SNORA40.15-201ENST00000516884 107 ntBASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 AL360157.1-201ENST00000565962 87 ntBASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 MIR4276-201ENST00000584832 70 ntBASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 AL021879.1-201ENST00000611756 288 ntBASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 7SK.10-201ENST00000621414 298 ntBASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CCDC163A0A0D9SF12 RNU4-15P-201ENST00000362613 141 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 RNU6-1301P-201ENST00000362724 104 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 RNU6-159P-201ENST00000391080 106 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 MIR1302-3-201ENST00000408128 138 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 MIR548F4-201ENST00000408515 105 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 COTL1P1-201ENST00000422309 375 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 EIF1P2-201ENST00000428233 350 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 IPO7P1-201ENST00000442031 636 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 DYNLT3P2-201ENST00000442517 295 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 UBBP3-201ENST00000445497 241 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 RPS29P31-201ENST00000446147 164 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 Z75741.1-201ENST00000446793 314 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 SNORA25.14-201ENST00000516481 132 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 HSPE1P20-201ENST00000538133 289 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 AP002770.2-201ENST00000543613 532 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 AC093023.1-201ENST00000547375 507 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 AC090517.1-201ENST00000569307 266 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 AC011476.5-201ENST00000615594 130 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 AC018555.1-201ENST00000567548 1980 ntBASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC163A0A0D9SF12 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 RNA5SP361-201ENST00000362686 118 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 RNU6-486P-201ENST00000363116 107 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 SNORD56.5-201ENST00000364281 72 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 RNU6-1180P-201ENST00000364935 107 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 SNORA63.7-201ENST00000365579 123 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 RNU6-463P-201ENST00000384340 107 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 MIR10B-201ENST00000385011 110 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 MIR568-201ENST00000385036 95 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 NDUFB1P1-201ENST00000435191 180 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 RPL23AP70-201ENST00000483361 460 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 AC006445.1-201ENST00000491925 405 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 RNA5SP54-201ENST00000516951 92 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 MIR3199-1-201ENST00000582434 88 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 RAC1P9-201ENST00000604990 392 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms