Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.18□□□□□ -0.3
Hdhd3Q9CYW4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hdhd3Q9CYW4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdhd3Q9CYW4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdhd3Q9CYW4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hdhd3Q9CYW4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hdhd3Q9CYW4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdhd3Q9CYW4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Hdhd3Q9CYW4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdhd3Q9CYW4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdhd3Q9CYW4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Hdhd3Q9CYW4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdhd3Q9CYW4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdhd3Q9CYW4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Gm37179-201ENSMUST00000194862 823 ntBASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdhd3Q9CYW4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Gm12085-201ENSMUST00000119263 940 ntBASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdhd3Q9CYW4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdhd3Q9CYW4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
Hdhd3Q9CYW4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms