Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssr1Q9CY50 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssr1Q9CY50 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Phf7-203ENSMUST00000226565 1971 ntBASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssr1Q9CY50 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Gm37055-201ENSMUST00000191866 133 ntBASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ssr1Q9CY50 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.47■□□□□ 0.39
Ssr1Q9CY50 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms