Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Gm25745-201ENSMUST00000174945 133 ntBASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Sec61bQ9CQS8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
Sec61bQ9CQS8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Sec61bQ9CQS8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Sec61bQ9CQS8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Sec61bQ9CQS8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Sec61bQ9CQS8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Sec61bQ9CQS8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Sec61bQ9CQS8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Sec61bQ9CQS8 Gm15442-201ENSMUST00000117905 1527 ntBASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Gm12497-201ENSMUST00000138778 237 ntBASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Gm43073-201ENSMUST00000198200 1189 ntBASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 AC159376.1-201ENSMUST00000218504 630 ntBASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 AC154757.1-201ENSMUST00000228289 336 ntBASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Gm19439-201ENSMUST00000198195 2273 ntBASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC8.64□□□□□ -1.03
Sec61bQ9CQS8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sec61bQ9CQS8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Sec61bQ9CQS8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sec61bQ9CQS8 Gm10305-201ENSMUST00000195331 2475 ntBASIC8.63□□□□□ -1.03
Sec61bQ9CQS8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sec61bQ9CQS8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sec61bQ9CQS8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sec61bQ9CQS8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sec61bQ9CQS8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms