Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Gm11336-201ENSMUST00000118168 334 ntBASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Gm18959-201ENSMUST00000208954 655 ntBASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb4Q91XZ6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Gm15565-201ENSMUST00000118890 427 ntBASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Mir1668-201ENSMUST00000184114 107 ntBASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Gm18421-201ENSMUST00000204122 625 ntBASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Gm45058-201ENSMUST00000205810 766 ntBASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb4Q91XZ6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb4Q91XZ6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb4Q91XZ6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.02■□□□□ 0.15
Pcdhb4Q91XZ6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb4Q91XZ6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhb4Q91XZ6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb4Q91XZ6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb4Q91XZ6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.02■□□□□ 0.15
Pcdhb4Q91XZ6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhb4Q91XZ6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb4Q91XZ6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Gm26039-201ENSMUST00000158152 144 ntBASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb4Q91XZ6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms