Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr1Q8VHP6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr1Q8VHP6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr1Q8VHP6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr1Q8VHP6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr1Q8VHP6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdhr1Q8VHP6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Gm18206-201ENSMUST00000207027 926 ntBASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Gm10060-201ENSMUST00000212002 111 ntBASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.71■□□□□ 0.11
Cdhr1Q8VHP6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cdhr1Q8VHP6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdhr1Q8VHP6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cdhr1Q8VHP6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdhr1Q8VHP6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms