Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc9Q8VC31 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc9Q8VC31 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc9Q8VC31 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc9Q8VC31 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc9Q8VC31 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc9Q8VC31 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc9Q8VC31 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc9Q8VC31 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc9Q8VC31 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc9Q8VC31 AV356131-201ENSMUST00000206201 750 ntBASIC19.5■□□□□ 0.71
Ccdc9Q8VC31 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc9Q8VC31 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc9Q8VC31 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc9Q8VC31 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc9Q8VC31 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc9Q8VC31 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.5■□□□□ 0.71
Ccdc9Q8VC31 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc9Q8VC31 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Gm10849-201ENSMUST00000100397 618 ntBASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc9Q8VC31 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc9Q8VC31 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Sybu-209ENSMUST00000228639 4113 ntBASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Gm7514-201ENSMUST00000209475 934 ntBASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc9Q8VC31 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
Ccdc9Q8VC31 Gm13034-201ENSMUST00000121342 3177 ntBASIC19.46■□□□□ 0.71
Ccdc9Q8VC31 Gm43697-201ENSMUST00000199637 2581 ntBASIC19.46■□□□□ 0.71
Ccdc9Q8VC31 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9Q8VC31 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9Q8VC31 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9Q8VC31 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9Q8VC31 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9Q8VC31 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.46■□□□□ 0.71
Ccdc9Q8VC31 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9Q8VC31 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9Q8VC31 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9Q8VC31 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9Q8VC31 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc9Q8VC31 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc9Q8VC31 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms