Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Gm36967-201ENSMUST00000193814 266 ntBASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Gm10493-201ENSMUST00000097270 612 ntBASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Actl10-202ENSMUST00000226583 1501 ntBASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim2Q8R1G6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Gm7290-201ENSMUST00000104990 617 ntBASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Gm12918-201ENSMUST00000120234 636 ntBASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Gm15710-201ENSMUST00000121821 636 ntBASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Gm5075-201ENSMUST00000196916 622 ntBASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Gm5874-201ENSMUST00000096101 508 ntBASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim2Q8R1G6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim2Q8R1G6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pdlim2Q8R1G6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Pdlim2Q8R1G6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pdlim2Q8R1G6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pdlim2Q8R1G6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pdlim2Q8R1G6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Pdlim2Q8R1G6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim2Q8R1G6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms