Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cachd1Q6PDJ1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cachd1Q6PDJ1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cachd1Q6PDJ1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cachd1Q6PDJ1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cachd1Q6PDJ1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cachd1Q6PDJ1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cachd1Q6PDJ1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cachd1Q6PDJ1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cachd1Q6PDJ1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cachd1Q6PDJ1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Gm2423-201ENSMUST00000074863 733 ntBASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cachd1Q6PDJ1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cachd1Q6PDJ1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cachd1Q6PDJ1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Gm12497-201ENSMUST00000138778 237 ntBASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cachd1Q6PDJ1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cachd1Q6PDJ1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cachd1Q6PDJ1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cachd1Q6PDJ1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cachd1Q6PDJ1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms