Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl6P27784 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl6P27784 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl6P27784 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl6P27784 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ccl6P27784 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl6P27784 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl6P27784 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl6P27784 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.61□□□□□ -0.39
Ccl6P27784 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccl6P27784 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl6P27784 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl6P27784 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl6P27784 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl6P27784 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl6P27784 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl6P27784 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ccl6P27784 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Ccl6P27784 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccl6P27784 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl6P27784 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.6□□□□□ -0.39
Ccl6P27784 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccl6P27784 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.6□□□□□ -0.39
Ccl6P27784 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccl6P27784 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ccl6P27784 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccl6P27784 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccl6P27784 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccl6P27784 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccl6P27784 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccl6P27784 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccl6P27784 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl6P27784 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Ccl6P27784 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccl6P27784 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccl6P27784 Gm37722-201ENSMUST00000193757 208 ntBASIC12.59□□□□□ -0.39
Ccl6P27784 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Gm18032-201ENSMUST00000222541 538 ntBASIC12.59□□□□□ -0.39
Ccl6P27784 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ccl6P27784 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ccl6P27784 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccl6P27784 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl6P27784 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccl6P27784 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccl6P27784 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccl6P27784 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccl6P27784 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccl6P27784 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccl6P27784 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl6P27784 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl6P27784 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl6P27784 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ccl6P27784 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms