Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Gm18195-201ENSMUST00000207604 706 ntBASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf9P20334 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Gm11594-201ENSMUST00000122313 162 ntBASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf9P20334 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Gm2651-201ENSMUST00000203560 838 ntBASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf9P20334 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf9P20334 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf9P20334 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf9P20334 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.11□□□□□ -0.31
Tnfrsf9P20334 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf9P20334 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf9P20334 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.11□□□□□ -0.31
Tnfrsf9P20334 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf9P20334 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms