Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Wnt10b-205ENSMUST00000226846 1204 ntBASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 App-207ENSMUST00000227737 2827 ntBASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC10.13□□□□□ -0.79
Igkv8-28A0A0G2JE47 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Gm42901-201ENSMUST00000197735 3171 ntBASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Mir5133-201ENSMUST00000174955 77 ntBASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Sybu-209ENSMUST00000228639 4113 ntBASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Igkv8-28A0A0G2JE47 Gm29340-201ENSMUST00000188763 3854 ntBASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Gm6211-202ENSMUST00000167849 925 ntBASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Gm42555-201ENSMUST00000199304 1039 ntBASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Igkv8-28A0A0G2JE47 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms